Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4024g00050 ATGAGAGATATAAGGAAAACAATGCATGGGTTGAAGCCAGCCCTCTTGATGTTGGTGGTGCAGATTGTAATTGCTACGGCGAATGTGCTCTACAAGCTTGCCATAAACGATGGAATGAGCGTCAGAGTAGTTACTGCTTACCGTCTCATCTTCGCAGCAGCATGCACTGTTCCACTTCCTCTTATTTTTGAAAGGAAGAACAGACCAAAGCTAACTTGGAGGGTGGTTTTTATGTCATTCTTTTGTGGCCTATTTGGCGGAAGTTTATTCCAAAACCTTTACTACGAGTCCTTGGCATTGATATCAGCAACATTTGCTTCCGCTGTTTATAATCTCATTCCTGCCGTCACTTTTATCTTGGCTGTCGCCTGCGGTTTCGAAAGATTAAATTTGCAAACGGTAGCAGGCAAAACTAAGGTGTTAGGAACGATAACAGGAGTTGGTGGGGCAATGATGCTGACCTTTCTCAAAGGTGTAGAAATTAACATTTGGACCTTCCACATTAATCTTTTGCATAAAAATGGCAACACCGGAACACTAAATGGTGACTCTGGTAGTAAATTGCTTGGTATTTTTTGTGGTCTTGGAAGCTCCTTCTCTTTTGCATTATGGCTCATCATTCAGGCTAAGATGAGCAAAGAATTCCCAAGCCATCTCTCGAGTACAGCTTTGATGAACTTAATGGGGGCAATACAATCTACTGTTTTTGCACTTTGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAATATTAGGCTTCTCACTGCAGCATTTTCGGGTATTTTGGCCTCTGGAATAATGGTTATTGCCATTGCATGGTGTGTCAGGATGAGAGGCCCATTGTATGCCTCTGTTTTCAACCCTCTTGTGCTTGTGCTTGTTGCCATTGCCGGTTCCTTAATGTTGGATGAGAACCTATACATAGGAAGTGTAATTGGAGCAGTGCTAGTTGTGATTGGATTATACATGGTGTTGTGGGGTAAGAGCAAAGAAAAGAAAAAGGTGACTCACTTAGAAATCACTCCAGGAATTGAAGAAATTGAGGTTGTTGTCACGTCCACGATCGTAGATAATGACAAAAACTGCTGCAGCAGCAGCCATTCCTGTATTGAGGGCAATATTGTTTGCATGGATCATGATCATTCATCAAAAACTGAACACGAAGTACAAGACACCGAGAATAACGGAAAAGAAGAAATAGCTAACAAGAACACAGAATCATGA 1230 0.4203 MRDIRKTMHGLKPALLMLVVQIVIATANVLYKLAINDGMSVRVVTAYRLIFAAACTVPLPLIFERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYYESLALISATFASAVYNLIPAVTFILAVACGFERLNLQTVAGKTKVLGTITGVGGAMMLTFLKGVEINIWTFHINLLHKNGNTGTLNGDSGSKLLGIFCGLGSSFSFALWLIIQAKMSKEFPSHLSSTALMNLMGAIQSTVFALCVEKDWSQWRLGWNIRLLTAAFSGILASGIMVIAIAWCVRMRGPLYASVFNPLVLVLVAIAGSLMLDENLYIGSVIGAVLVVIGLYMVLWGKSKEKKKVTHLEITPGIEEIEVVVTSTIVDNDKNCCSSSHSCIEGNIVCMDHDHSSKTEHEVQDTENNGKEEIANKNTES 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4024g00050 409 MobiDBLite consensus disorder prediction 384 409 - -
Gabi4024g00050 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 333 - -
Gabi4024g00050 409 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi4024g00050 409 Pfam EamA-like transporter family 12 136 IPR000620 GO:0016020
Gabi4024g00050 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 137 - -
Gabi4024g00050 409 PANTHER WAT1-RELATED PROTEIN 12 338 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4024g00050 Gabi-Chr4024 565957 569885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4024g00050 11 351 Nodulin-like Gene Family AT1G25270 40.580 1.60e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4024g00050 - - gmx:100809587 497.664