Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4024g00048 ATGAGAGATATAAGGAAAGCAATGCATCGGTTGAAGCCAGCCCTCTTGATGTTGGTGGTGCAGATTGTACTTGCTACGGGGAATGTGCTCTACAAGCTTGCCATAAACGATGGAATGAGCGTTAGAGTAGTTACTGCTTACCGTCTCATTTTTGCAGCAGCATGCACTGTTCCACTTGCTCTTATTCTTGAAAGGAAGAACAGACCAAAGCTAACTTGGAGGGTGGTTTTTATGTCATTCTTTTGTGGCCTATTTGGGGGAAGTTTATTCCAAAACCTTTACTTCGAGTCCTTGGCATTGATATCAGCAACATTTGCTTCCGCTGTTTATAATCTCATTCCTGCCGTCACTTTTATCTTGGTTGTCGTCTGCGGTTTCGAAATATTAAATTTGCAAACGGTAGCAGGCAAGACTAAGGTGTTAGGAACGATAATAGGAGTTGGCGGGGCAATGATGCTGACCTTTCTCAAAGGTGTAAAAATTAACATTTGGAACTTCCACATTAACCTTTTGCATAAAAATGGCCACACGGAAACACTAAATGGTGACTATGGTAGTAAATTGCTTGGTATTTTTTGTGGTCTTGGAAGCACCTTCTCTTATGCATTATGGCTTATCATTCAGGCTAAGATGAGCAAAGAATTTCCAAGCCATCTCTCGAGTACAGCTTTGATGAACTTAATGGGGGCAATACAATCTACTGTTTTTGCCCTTTGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAATATTAGGCTTCTCACTGTAGCATTTTCGGGTATTTTGGCCTCTGGAATAATGGTTATTGTCATTGCATGGTGTGTCAGGATGAGAGGCCCACTGTATGCCTCTGTTTTCAACCCTCTTGTGCTTGTGCTTGTTGCCATTGCTGGTGCCTTAATGTTGGATGAGAACCTATACATAGGAAGTGTAATTGGAGCAGTGCTAGTTGTGATTGGATTGTACATGGTGTTGTGGGGTAAGAGCAAAGAAATGAAAAAGGTGACTCACTTAGAAATCACTCCAAGAATTGAAGAAATTGAGGTTGTTGTCACGTCCACGACCGTAGATCATGATAAAAGTAACTGCAGCAGCAACAGCCATTCCAGTATTGAGGGCAATATTGTTTGTAAGGATCATGATAATTCATCAAAAAATGAACATGAAGTACAAGACACAGAGAATAATTGA 1197 0.4127 MRDIRKAMHRLKPALLMLVVQIVLATGNVLYKLAINDGMSVRVVTAYRLIFAAACTVPLALILERKNRPKLTWRVVFMSFFCGLFGGSLFQNLYFESLALISATFASAVYNLIPAVTFILVVVCGFEILNLQTVAGKTKVLGTIIGVGGAMMLTFLKGVKINIWNFHINLLHKNGHTETLNGDYGSKLLGIFCGLGSTFSYALWLIIQAKMSKEFPSHLSSTALMNLMGAIQSTVFALCVEKDWSQWRLGWNIRLLTVAFSGILASGIMVIVIAWCVRMRGPLYASVFNPLVLVLVAIAGALMLDENLYIGSVIGAVLVVIGLYMVLWGKSKEMKKVTHLEITPRIEEIEVVVTSTTVDHDKSNCSSNSHSSIEGNIVCKDHDNSSKNEHEVQDTENN 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4024g00048 398 MobiDBLite consensus disorder prediction 376 398 - -
Gabi4024g00048 398 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
Gabi4024g00048 398 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Gabi4024g00048 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Gabi4024g00048 398 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0016020|GO:0022857
Gabi4024g00048 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4024g00048 Gabi-Chr4024 532859 537970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4024g00048 11 383 Nodulin-like Gene Family AT1G25270 38.874 1.97e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4024g00048 - - gmx:100798755 486.108