Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4024g00047 ATGAGAGATATAAGGAAAGTAATGCATGGGTTGAAGCCAGCCCTCTTGATGTTGGTGGTGCAGATTGTAATTGCTACGGCGACTGTGCTCTACAAGCTTGCCATAAACGATGGAATGAGCATTAGAGTAGTTACTGCTTACCGTCTCATTTTTGCAGCAGCATGCACTGTTCCACTTCCTCTTATTCTTGAAAGGAAGAACAGACCAAAGCTGACTTGGAGGGTGGTTTTTATGTCATTCTTTTGTGGCCTATTTGGGGGAACGTTATTCCAAATCCTTTACTACGAGTCCTTGGCATTGATATCAGCAACATTTGCTTCCGCGGTTTATAATCTCATTCCTGCCATCACTTTTATCTTGGCTGTCGCTTGCGGTTTCGAAAGATTAAATTTGCAAACGGTAGCAGGCAAGACTAAGGTGTTAGGAACGATAACAGGAGTTGGCGGGGCAATGATGCTGACCTTTCTCAAAGGTGTAGAAATTAACATTTGGACCTTCCACATTAACCTTTTGCATAAAATTGGCGACACGGGAACACTAAATGGTAACTCTGGTAGTAAATTGCTTGGTATTTTTTGTGGTCTTGGAAGCTGCTTCTGTTTTGCATTATGGCTTATCATTCAGGCTAAGATGAGCAAAGAATACCCGAGCCATCTCTCGAGTACAGCTTTGATGAACTTAATGGGGGCAATACAATCTACTATTTTTTCCCTTTGTGTTGAGAAGGATTGGAGCCAATGGAGGTTGGGTTGGAATATTAGGCTTCTCACAGCAGCATTTTCGGGTGTTGTGGCCTCTGGAATAATGGTTATCGTCATTGCATGGTGTGTCAGGATGAGAGGCCCACTGTATGCCTCTGTTTTCAACCCTCTTGTGCTTGTGCTTGTTGCCATTGCTGGTTCCTTAATGTTGGATGAGAACCTATACATAGGAAGTGTAATTGGAGCAGTGTTAATTGTGATTGGATTGTACATGGTGTTGTGGGGTAAGAGCAAAGAAATGAAAAAGGTGACTCACTCACAAATCACTCGAGGAATTGAAGAAATTGAGGTTGTTGTCACGTCCACGACCGTAGATCATGATAAAAGTAACCGCGACAGCAACAACCATTCCTGTATTGAGGGCAATATTATTTGCAAGGATCATGATAATTCATCAAAAACTGAACACGAAGTACAAGAAATCGAGAATAATGGAAAAGAAGAAACAGCTAACAAGGACATAATCATAACGGGTACATGTTAG 1245 0.4193 MRDIRKVMHGLKPALLMLVVQIVIATATVLYKLAINDGMSIRVVTAYRLIFAAACTVPLPLILERKNRPKLTWRVVFMSFFCGLFGGTLFQILYYESLALISATFASAVYNLIPAITFILAVACGFERLNLQTVAGKTKVLGTITGVGGAMMLTFLKGVEINIWTFHINLLHKIGDTGTLNGNSGSKLLGIFCGLGSCFCFALWLIIQAKMSKEYPSHLSSTALMNLMGAIQSTIFSLCVEKDWSQWRLGWNIRLLTAAFSGVVASGIMVIVIAWCVRMRGPLYASVFNPLVLVLVAIAGSLMLDENLYIGSVIGAVLIVIGLYMVLWGKSKEMKKVTHSQITRGIEEIEVVVTSTTVDHDKSNRDSNNHSCIEGNIICKDHDNSSKTEHEVQEIENNGKEETANKDIIITGTC 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4024g00047 414 PANTHER WAT1-RELATED PROTEIN 12 339 IPR030184 GO:0016020|GO:0022857
Gabi4024g00047 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 137 - -
Gabi4024g00047 414 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 332 - -
Gabi4024g00047 414 Pfam EamA-like transporter family 12 136 IPR000620 GO:0016020
Gabi4024g00047 414 Pfam EamA-like transporter family 189 327 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4024g00047 Gabi-Chr4024 511737 513653 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4024g00047 11 383 Nodulin-like Gene Family AT1G25270 39.678 1.40e-93 283
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4024g00047 - - gmx:100809587 507.294