Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4020g00050 ATGGTTCCCAGTGAGATCAGAGGAGTCCATTATCTAGCACCTGAAAATCCATTCCTAGTTCCACCAAACTTTGGCTTGCTACAGAGTGATATTCCAAACCTTCATCTGAATAGCCTCTTAACCAGCTTGCCAAACTGCCACTTCCCATCTTCAGGCCATGAATTTGTTCCTCCTTCATGCCTCAGCAGCAACTCAACTTCTGATGAAGCTGATGAACTTCAATTCAACGTCATCGATGAAAGAAAGCAAAGGCGAATGATATCTAACAGAGAATCTGCACGCAGATCAAGGATGAGGAAGCAAAAGCACTTGGATGAACTGTGGTCACAGGTGGTTAGACTAAGAACTGAGAATCACAACCTTATTGACAAACTGAACCATGTTTCTGAGTCCCATGACCGAGTTGTTCAAGAGAATGCACGCCTCAAGGAAGAAACTTCTGATCTTCGCCAAATGCTAGCAGACATGCAAATTGGAAACTCTTTTGCTTGCACCTTGAGAGATTTTGATGAGGTTCCATGTAACACATCTCAACTCAAAGCTGAATCATCAAACCAATCTATTACTTCTGCGGACTTGATTCATGAATGA 591 0.4264 MVPSEIRGVHYLAPENPFLVPPNFGLLQSDIPNLHLNSLLTSLPNCHFPSSGHEFVPPSCLSSNSTSDEADELQFNVIDERKQRRMISNRESARRSRMRKQKHLDELWSQVVRLRTENHNLIDKLNHVSESHDRVVQENARLKEETSDLRQMLADMQIGNSFACTLRDFDEVPCNTSQLKAESSNQSITSADLIHE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4020g00050 196 FunFam BZIP transcription factor 79 130 - -
Gabi4020g00050 196 CDD bZIP_plant_GBF1 82 133 IPR045314 GO:0003700|GO:0006355
Gabi4020g00050 196 Gene3D - 79 134 - -
Gabi4020g00050 196 Coils Coil 125 145 - -
Gabi4020g00050 196 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 84 99 IPR004827 GO:0003700|GO:0006355
Gabi4020g00050 196 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 79 142 IPR004827 GO:0003700|GO:0006355
Gabi4020g00050 196 SMART brlzneu 77 141 IPR004827 GO:0003700|GO:0006355
Gabi4020g00050 196 Pfam bZIP transcription factor 81 131 IPR004827 GO:0003700|GO:0006355
Gabi4020g00050 196 SUPERFAMILY Leucine zipper domain 81 131 IPR046347 GO:0003700|GO:0006355
Gabi4020g00050 196 MobiDBLite consensus disorder prediction 177 196 - -
Gabi4020g00050 196 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 8 168 IPR044521 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4020g00050 Gabi-Chr4020 550856 551462 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4020g00050 28 174 bZIP Transcription Factor Family AT3G30530 54.971 1.46e-49 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4020g00050 bZIP_1 8.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4020g00050 - - gmx:778126 347.436