Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4020g00043 ATGGATCCTTCCTTTCTTTCAAAATCCTTCTTTCTACATGTTGTTCTTATGTTCGGTTTGCATGGTGTCACCAGATTGTATGCAAGTGACCCTCCTCTAACACTGGATTACTATGCATCAACTTGTCCCACTATTTTTGATATTGTTAAGAAGGAAATGGAATGTGCAGTGCTTTCTGATCCCCGTAACGCAGCCTTGATACTTCGGCTTCACTTCCATGACTGCTTTATTCAGGTACATTCATGGTCTCAGGGATGCGATGGATCAGTTTTGCTTGATGATACAGTCACACTTAAAGGTGAGAAGAAAGCAGATACCAACATCCACTCTCTAAAAGGCTTCGGACTTGTTGATCGAATCAAGAACTTAGTTGAATCAGAATGCCCCGGAATTGTTTCTTGTGCTGATGTTCTCACTATTGCAGCTAGAGATGCTGTGATTCTGGTAGGTGGACCTTACTGGGATGTTCCAGTGGGAAGGAAGGATTCTATAACTGCAAGTTTTGAACTTGCTAACACCAATCTTCCCACTCCGAATGAGAGTCTTCTCTCTATAATCTCCAAGTTTCTTTATCAAGGTCTATCAGTCACGGATATGGTAGCCCTTTCAGGAGCCCACACCATTGGCATGGCACGGTGTCAGAATTTCAGATCAAGGATTTACACAGATTTTGAATCAACTTCAGTGAAAAATCCAATATCTGAGAGTCACCTCAACAACCTGAAATCTATTTGTCCACCAATTGGGGGAGGAGACAATAACATATCAGCATTGGACTATGTTACACCCAATCTCTTTGACAATTCCTACTACCAGTTACTATTAAACAGGGAGGGACTTCTTAACTCAGACCAAGAAATGTACTCAAGTGTTTTTGGAATTGAAACAAGAGAGCTTGTCAAGAAGTATGCTGCAGATCCTCTTGCTTTCTTCCAGCAATTCTCGTATTCAATGGTGAAAATGGGAAATATCACAAATTCAGAAAGCTTCATCACCGGAGAAGTTAGGAAGAACTGCAGATTTGTGAACACATAG 1035 0.4116 MDPSFLSKSFFLHVVLMFGLHGVTRLYASDPPLTLDYYASTCPTIFDIVKKEMECAVLSDPRNAALILRLHFHDCFIQVHSWSQGCDGSVLLDDTVTLKGEKKADTNIHSLKGFGLVDRIKNLVESECPGIVSCADVLTIAARDAVILVGGPYWDVPVGRKDSITASFELANTNLPTPNESLLSIISKFLYQGLSVTDMVALSGAHTIGMARCQNFRSRIYTDFESTSVKNPISESHLNNLKSICPPIGGGDNNISALDYVTPNLFDNSYYQLLLNREGLLNSDQEMYSSVFGIETRELVKKYAADPLAFFQQFSYSMVKMGNITNSESFITGEVRKNCRFVNT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4020g00043 344 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Plant peroxidase signature 316 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Plant peroxidase signature 257 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Plant peroxidase signature 197 209 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Plant peroxidase signature 273 290 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 Gene3D - 37 343 - -
Gabi4020g00043 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 198 208 IPR019793 -
Gabi4020g00043 344 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Gabi4020g00043 344 Pfam Peroxidase 49 306 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 Gene3D Peroxidase, domain 2 176 321 - -
Gabi4020g00043 344 FunFam Peroxidase 176 321 - -
Gabi4020g00043 344 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Haem peroxidase superfamily signature 259 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PRINTS Haem peroxidase superfamily signature 198 213 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 ProSiteProfiles Plant heme peroxidase family profile. 32 343 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 PANTHER PEROXIDASE 72-RELATED 32 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 SUPERFAMILY Heme-dependent peroxidases 33 343 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4020g00043 344 CDD secretory_peroxidase 33 342 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4020g00043 Gabi-Chr4020 502334 504696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4020g00043 28 344 Peroxidase AT1G68850 72.013 1.37e-173 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4020g00043 K00430 - gmx:100780750 594.734