Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4020g00041 ATGGCAAAAGATACTTCCGGTTCTGATTCCCATAATAAACGTCTTGGTCTTTTAAAAGATCAAGTTCATTTGGTTAAAAGGAAAGACTCCGATCGCTATGAGATTGCTCCAATCCAAGATCAACTATCATTTGAGAAGGGTTTTTTTATAGTAATTCGTGCATGCCAAGTGTTAGCCCAAAAGAATGATGGAATAATATTGGTAGGGGTGGCAGGTCCTTCAGGGGCAGGGAAGACTGTATTTACGGAAAAAATACTCAGTTTCATGCCCAGCATTGCAGTCATTTCAATGGATAATTACAATGATGCTAGCCGAATTGTTGATGGAAACTTTGATGATCCACGGTTAACAGACTACGAGACATTGCTCCAGAATCTACATGATTTAAAGGAAGGAAAGCCAGTCCAAGTTCCTATATATGATTTCAAGTCCAGTTCACGGACAGGTTACAGGACCGTAGAAGCCCCAAGTTCCCGTATTGTGATTATAGAGGGCATCTATGCTTTGAGTGAGAAGTTGCGACCTCTACTGGACCTTCGAGTCTCTGTTACAGGTGGAGTTCACCTTGACCTCGTAAAGCGAGTTATACGAGACATACAACGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATATCCAATGTACAAGGCCTTTATTGAGCCGGATCTCCAGACAGCACATATAAAAATAATCAATAAATTCAATCCATTTACTGGATTCCAGAGTCCTACTTACATATTAAAGTCAGCAAGGGATGTTACAGTGGATCAAATTAAAGCTGTTCTCTCTGAAGATCTTAAGGAAACAACAGAGCAAACCTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAAACTTGCCAATCATATTTACGGATGCGGAATAAGGATGGAAAATACAGTCTCATGTTTGAGGAATGGGTGACAGATAATCCTTTTGTCATATCGCCAAGAATTACTTTTGAGGTCAGTGTGCGCCTCCTTGGTGGACTAATGGCCTTGGGATACACAATAGCTACTATCCTTAAGAGAAACAGCCATATCTTTTTTGATGAGAGGGTTTGTCTGAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAAGGAAGAGACCGCTTAGTTGTAAAAGACATAGGACAGCAGCTGGGTCTAGAAGGTTCCTACATTCCTCGCACCTACATTGAGCAAATTCAACTTGAAAAGCTTGTGAATGAGGTTATGGCCCTACCAGATGATTTGAAGACAAAGCTCAGCCTAGATGAGGATTTGGTGTCTAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCCAACAGGGTTGCCGCGAGAAATAAACATCTGAGGAGTGGAATGTCACAGTCATATACAAATCAAAGGGACAAAAGTCTAGCCAAAGCTACTGGATATGTTGCCACCAATCAAGGGTTTGTTGAAAGAAATCCAGATTCTTCTGCAACAATAGTAAATCATGGAGCCATCAGTCAGCTTTCAGATCAAATTTCTGCCCTTAATGATAGAATGGATGAGTTTACAAATCGTATCGAAGAGCTGAACTCCAAGTTAACCATCAATAGTACTTCTCCAAGCCAAAAAAATTTGTCATTTCAAGCTGAGGCCTGCAACGGTTCTGCACCCACGTCTTACTTCATCACTAATTTGGGCAATGGTTCCCTAACTGGATCTAAAATGCCAAATTCTTCATCTTCATCACAATTAGCTAAAGATTCTCCTTTAATGGAAGAGATATCAGGTATTGTACGTGGTCAGCGTCAGATCGTGCATCAATTGGACAATCTCAATAATCTTCTCAGGGGGGCCTCTGGGGGGATGTCTCACCAAACAAGAACCAACAGAAAAAGCATAGCAACGGATTCAGGTTACACTGGAGCTCGTGTTATGGTGGTGGTAGCAGTTGGTTGTTTGGGGATATTCTTGATGAAGGGTTTGTTGACACGAAAGTGA 1992 0.4132 MAKDTSGSDSHNKRLGLLKDQVHLVKRKDSDRYEIAPIQDQLSFEKGFFIVIRACQVLAQKNDGIILVGVAGPSGAGKTVFTEKILSFMPSIAVISMDNYNDASRIVDGNFDDPRLTDYETLLQNLHDLKEGKPVQVPIYDFKSSSRTGYRTVEAPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSARDVTVDQIKAVLSEDLKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHIFFDERVCLKLDWLEQLNRHYVQVQGRDRLVVKDIGQQLGLEGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASANRVAARNKHLRSGMSQSYTNQRDKSLAKATGYVATNQGFVERNPDSSATIVNHGAISQLSDQISALNDRMDEFTNRIEELNSKLTINSTSPSQKNLSFQAEACNGSAPTSYFITNLGNGSLTGSKMPNSSSSSQLAKDSPLMEEISGIVRGQRQIVHQLDNLNNLLRGASGGMSHQTRTNRKSIATDSGYTGARVMVVVAVGCLGIFLMKGLLTRK 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4020g00041 663 PANTHER URIDINE KINASE 35 423 - -
Gabi4020g00041 663 Pfam CYTH domain 269 404 IPR023577 -
Gabi4020g00041 663 Gene3D - 66 274 IPR027417 -
Gabi4020g00041 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Gabi4020g00041 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 236 IPR027417 -
Gabi4020g00041 663 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Gabi4020g00041 663 CDD UMPK_like 67 239 - -
Gabi4020g00041 663 PRINTS Uridine kinase signature 132 147 - -
Gabi4020g00041 663 PRINTS Uridine kinase signature 65 82 - -
Gabi4020g00041 663 PRINTS Uridine kinase signature 188 198 - -
Gabi4020g00041 663 PRINTS Uridine kinase signature 224 237 - -
Gabi4020g00041 663 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Gabi4020g00041 663 Coils Coil 503 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4020g00041 Gabi-Chr4020 473045 492345 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4020g00041 66 236 PRT Gene Family AT5G40870 27.778 1.90e-18 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4020g00041 K00876 - gmx:100781286 1139.79