Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4018g00004 ATGTCATCGTCGAACTCACCGTGCGCGGCGTGCAAGTTTCTGCGGCGGAAGTGCACGCAGGAGTGCCCGTTCGCGCCGTACTTCCCGCCGGACAACCCGCAACGGTTCGCGTGCGTGCACCGTGTGTTCGGTGCTAGCAACGTGGCGAAGCTGCTGAACGAGCTGAGCGCGTCGCAGCGTGACGATGCCGTTAAGTCTTTAGCGTACGAGGCGGAGGCGCGGTTGAGGGATCCCGTGTACGGTTGCGTGGGGTTCATCTCATTGCTTCAGCAGCGTCTCAGGCAAATCCAAACGGACCTTCACAATGCAAAGAAGGAACTCGCTACCTACCTCAGTCCTCAGGCTATGCAGTGCCTCTTGGCCAATCCTGGTATGCTGCAATCTGCTGGGGTTGTTATGCCTGGCGGCGGCAGCAGCAGCGGCCATCATCAATTTCCGCCTGGGAATCCCAATAATATGCCGCCGCCGGTTTTTGCGGGGCACGGCGGAGGCCAATTGGTTATCCGTGAGCCTCAACAACAAGAGTTTTTTGAGGCTCAGCAATTGGCTGCAGTTGCTGCTGCTCGAGAACAGCAGCAACAACAAACTATGTTGAGGAACTACGAGCAGCAACAAGAACTTCTCCGATTCAATAGCGGGTTTGAACCGGTGGGTTCAGTTGCTCTTGCTGATGGTGGTGTTGGTGGTAGTGGGTTCGGTAACCATATGGGTGCTCCTGGTCCTGGTCCTGGTCCTGGTCCTTCTGAGATGTCTCCTTCTTTGGCTTTGGGTACCTTTGATAATGTTGGCTCTTATCAGATGCAGCAGCAACAACAGCAACCACAGCAAGGGGAACATCATGTTCATCCTCATCACCATCCAATTGAGGCACAGCTTCTTATGTCCCCACAGCATCAAAGCCAGAACTCTCAACAACAATCGCAGCAGCAACATTCTGAAAGCGGGGACGGTAGGAGCCTTGGTCCTTCTTGTTGA 975 0.5487 MSSSNSPCAACKFLRRKCTQECPFAPYFPPDNPQRFACVHRVFGASNVAKLLNELSASQRDDAVKSLAYEAEARLRDPVYGCVGFISLLQQRLRQIQTDLHNAKKELATYLSPQAMQCLLANPGMLQSAGVVMPGGGSSSGHHQFPPGNPNNMPPPVFAGHGGGQLVIREPQQQEFFEAQQLAAVAAAREQQQQQTMLRNYEQQQELLRFNSGFEPVGSVALADGGVGGSGFGNHMGAPGPGPGPGPSEMSPSLALGTFDNVGSYQMQQQQQQPQQGEHHVHPHHHPIEAQLLMSPQHQSQNSQQQSQQQHSESGDGRSLGPSC 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4018g00004 324 ProSiteProfiles LOB domain profile. 6 107 IPR004883 -
Gabi4018g00004 324 Coils Coil 184 204 - -
Gabi4018g00004 324 Coils Coil 86 106 - -
Gabi4018g00004 324 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Gabi4018g00004 324 MobiDBLite consensus disorder prediction 254 277 - -
Gabi4018g00004 324 MobiDBLite consensus disorder prediction 293 324 - -
Gabi4018g00004 324 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 4 306 - -
Gabi4018g00004 324 MobiDBLite consensus disorder prediction 232 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4018g00004 Gabi-Chr4018 64821 65831 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4018g00004 1 240 AS2 family AT5G66870 54.104 7.46e-69 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gabi4018g00004 LOB 1e-40 No_clan