Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4018g00002 ATGGAGCTGAGCTTGGATTTGTGTTTGACCTTTGCACCCAGAACCATTTCTGAGCTTCTTGGCGAGGTTTCTAAGAGCAAAGAAGGGTCTCAGAAAATGACCATGCTTGAGGACTACGTCAAAAAGTTGGAAGATGAGATGAGGAAGATCGAGGCCTTCAAACGTGAGCTTCCTCTATGCATGATCCTCGTAAACTATGCTATAGCTAGATTGAAGGAGGAAATAGAAGGGTGTATGAGAATGCAAGATGAACCCGTGGTTGAAGAATTGATGCCACTGATGAAAACCAATTTTGAAGGAAAAGGGTCATTGAACATGTGGAAGGAAATTAGTGACAAGAAGAACTGGATGAGCTCTGCTCAGCTATGGAGCGTTGAAACCAAATTGAGAACTGAAGAAGATAATTGGTCTGTGCCCGAGAACCCAATTGAACCACCGAACGAGACCAACAACAATGGAAGAGCATTTCTAGCATTCAGTGGAAACTCAAAGACAGTGAAAAGGGATGAAAAGGAGGTTTCACATTTTCCTAAACTTAGTTTGATGACTCCAGAGTTTGAACAGAATCATAGAAAATCCAAAAGGGGTTGTGGAGGTAGTCATGATTCGTCTTTGATTACAAGCAAGATTAAGGGTCAACCGCAACAACAACAACAGAATCCGAGGAAACAAAGGCGATGCTGGTCACCAGAGCTTCATCGGCGATTTGTTGATGCGCTTCATCAATTGGGAGGACCACAAGTGGCCACTCCTAAGCAGATTAGAGAATTGATGCAGGTGGGAGGCTTGACAAATGATGAAGTCAAAAGCCATTTGCAAGTTTTCTATGCTGAATTTTATGTAAATGCAAATATACATGGGAATTCTCCTTGGAAATATCTATTTTGA 888 0.42 MELSLDLCLTFAPRTISELLGEVSKSKEGSQKMTMLEDYVKKLEDEMRKIEAFKRELPLCMILVNYAIARLKEEIEGCMRMQDEPVVEELMPLMKTNFEGKGSLNMWKEISDKKNWMSSAQLWSVETKLRTEEDNWSVPENPIEPPNETNNNGRAFLAFSGNSKTVKRDEKEVSHFPKLSLMTPEFEQNHRKSKRGCGGSHDSSLITSKIKGQPQQQQQNPRKQRRCWSPELHRRFVDALHQLGGPQVATPKQIRELMQVGGLTNDEVKSHLQVFYAEFYVNANIHGNSPWKYLF 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4018g00002 295 Gene3D - 222 278 - -
Gabi4018g00002 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 220 280 IPR017930 -
Gabi4018g00002 295 MobiDBLite consensus disorder prediction 200 225 - -
Gabi4018g00002 295 SUPERFAMILY Homeodomain-like 221 276 IPR009057 -
Gabi4018g00002 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 15 273 IPR044787 GO:0003700|GO:0006355
Gabi4018g00002 295 Pfam Myb-like DNA-binding domain 225 273 IPR001005 -
Gabi4018g00002 295 NCBIfam myb-like DNA-binding domain, SHAQKYF class 223 276 IPR006447 GO:0003677
Gabi4018g00002 295 MobiDBLite consensus disorder prediction 184 228 - -
Gabi4018g00002 295 MobiDBLite consensus disorder prediction 133 153 - -
Gabi4018g00002 295 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4018g00002 Gabi-Chr4018 26908 35361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4018g00002 1 285 G2-like Transcription Factor Family AT4G37180 42.612 7.67e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi4018g00002 Myb_DNA-binding 5.9e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4018g00002 - - lang:109332341 331.643