Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4016g00002 ATGTCGAATTTGCCTCAATCTCTCTCTATGAACGCGGCTTTTGGTGGTGGCGCTCCTCCTCCTCCTCCTGGTGGCTCCGCCCAGGGCTCCTCCGCCACCAAGGATCGCAAGATGGCCTCTGCGGAGCAGCTTGTCCTCGAGCTCAGCAACCCTGAACTCCGTGAAAACGCTCTTCTCGAGCTCTCTAAGAAGAGAGAGCTATTTCAAGATCTTGCTCCATTGTTATGGAATTCTTTTGGTACTATTGCTGCACTTTTGCAGGAAATAGTTTCAATATACCCTGTTCTTTCACCACCAAATCTTACTCCAGCACAATCAAATCGAGTGTGTAATGCACTTGCTCTTCTTCAGTGTGTAGCATCTCACCCTGATACAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTGTATCCGTTCCTCAATACCACAAGCAAGTCAAGACCATTTGAGTACTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCCTTGGTGAAGGTTGATGATACGGAAGTCATAAGTTTCCTTCTTTCAACAGAGATAATTCCTCTGTGCCTACGCACCATGGAAATGGGCAGTGAATTGTCAAAAACAGTCGCCACATTTATAGTTCAAAAAATTCTCTTAGATGATGTTGGCTTGGATTACATATGTACCACAGCAGAGCGTTTTTTTGCAGTAGGTCGAGTTTTAGCGAGCATGGTGGGAGCTCTGGCTGAGCAACCCTCATCTCGTCTGCTGAAGCATATTATCCGATGCTATCTTCGCTTATCTGATAACCCGAGGGCATGTGATGCACTTAGAAGCTGTCTTCCGGAGATGTTAAGAGATGCTACTTTCAGCAGTTGTCTTCGTGAAGACCCCACAACTAGGAGGTGGCTACAACAATTGCTTCACAATGTTGGAGGGAATCGGGTTCCTGCACTACAAGCTGGAGGAGGTTTTGATCATATGATGTGA 963 0.4621 MSNLPQSLSMNAAFGGGAPPPPPGGSAQGSSATKDRKMASAEQLVLELSNPELRENALLELSKKRELFQDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMLFLNAHIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLASMVGALAEQPSSRLLKHIIRCYLRLSDNPRACDALRSCLPEMLRDATFSSCLREDPTTRRWLQQLLHNVGGNRVPALQAGGGFDHMM 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4016g00002 320 MobiDBLite consensus disorder prediction 1 37 - -
Gabi4016g00002 320 FunFam Cell differentiation protein RCD1 34 305 - -
Gabi4016g00002 320 Gene3D - 32 303 IPR011989 -
Gabi4016g00002 320 SUPERFAMILY ARM repeat 46 276 IPR016024 -
Gabi4016g00002 320 Pfam Cell differentiation family, Rcd1-like 44 302 - -
Gabi4016g00002 320 PANTHER UNCHARACTERIZED 34 306 IPR007216 GO:0006402|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4016g00002 Gabi-Chr4016 10364 25864 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Gabi4016g00002 Rcd1 1.4e-129 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4016g00002 K12606 - gmx:100792784 583.178