Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4011g00004 ATGCAAATGGCACCCCAAACCATATCCATCGACTTCCACACCACCCGGGTCTTACCCTTACCCGAACCCGATGTCTTTATACACACTTCCGATGGGACACGCATTCCAGCCCACACAAGCATTCTGGCTTCAGCGTCTCCGGTTTTGGAGAACAAGATAGATCGACCACGCAAGCATCGGAGCTCCGAAAGAATCATCCAAATCCACGGCGTTCCTTCCGACGCCGTAACCGCCTTCGTCAGCTTCTTGTACTCCTCGAGGTGTGCGGAGGATGAGATGGACAGGTACGGGATGCACCTGCTGGCATTGTCGCACGTGTACATGGTGCCGCAGCTGAAGCAGAGGTGCATCAAGGGTCTGGCACAGCGCTTGACCACGGAGAACGTGGTGGACGTGCTGCAACTGGCGAGGCTCTGCGACGCACCGGATCTCCACCTCCGCTGCATGAAGCTCCTCACCAATCATTTCGTGACTGTGGAGGAAACCGAAGGGTGGAAGTTCCTCATCAAGCATGATCCATGGCTCGAGCTCGACATCCTTCGCTTCATGGACGAAAACGAAACGAGGAAAGAGAAATCGAGGAGGCATAGGGAGGAGCAGGGGCTGTATGCACAGCTGAGCGAAGCAATGGAGTGTTTGGAGCACATATGTACGGAGGGGTGCATCGACGTTGGACCGTACGATGTGGAGGTGAGCGGAGAGAGGAAGCCGTGTAGCAGATTCTCCACGTGTCAAGGTCTTCAGCTCTTGATTCGCCACTTTGCCACGTGCAAGAGGAGGATGAGCGGAGGGTGCTTGCGGTGTAAGCGAATGTGGCAGCTCTTCCGACTCCATTCCTACATTTGTCAACAATCCGATTCCTGCAAGGTTCCTCTTTGCAGGCAAATTCAATTGAGAATGCAGCAAGGGAAAAGGAAAGATGATGCAAGGTGGAAACTACTAGCGAGGAAGGTGGCCTCAGCCAAAGTCATGTCTTCCTTGTCTCTGCCAAAGAGGAAACGGGATGAGGAAATGAGAGTGACTATAAACAATCCTGGGATAAGAAGTTTTGAATTACAATGA 1062 0.5292 MQMAPQTISIDFHTTRVLPLPEPDVFIHTSDGTRIPAHTSILASASPVLENKIDRPRKHRSSERIIQIHGVPSDAVTAFVSFLYSSRCAEDEMDRYGMHLLALSHVYMVPQLKQRCIKGLAQRLTTENVVDVLQLARLCDAPDLHLRCMKLLTNHFVTVEETEGWKFLIKHDPWLELDILRFMDENETRKEKSRRHREEQGLYAQLSEAMECLEHICTEGCIDVGPYDVEVSGERKPCSRFSTCQGLQLLIRHFATCKRRMSGGCLRCKRMWQLFRLHSYICQQSDSCKVPLCRQIQLRMQQGKRKDDARWKLLARKVASAKVMSSLSLPKRKRDEEMRVTINNPGIRSFELQ 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4011g00004 353 SMART TAZ_2 200 294 IPR000197 -
Gabi4011g00004 353 Pfam TAZ zinc finger 207 293 IPR000197 -
Gabi4011g00004 353 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 22 336 IPR044513 -
Gabi4011g00004 353 SUPERFAMILY TAZ domain 198 297 IPR035898 -
Gabi4011g00004 353 FunFam BTB/POZ and TAZ domain-containing protein 2 196 322 - -
Gabi4011g00004 353 SMART BTB_4 23 124 IPR000210 GO:0005515
Gabi4011g00004 353 ProSiteProfiles BTB domain profile. 23 92 IPR000210 GO:0005515
Gabi4011g00004 353 FunFam BTB/POZ and TAZ domain-containing protein 2 125 195 - -
Gabi4011g00004 353 Gene3D - 125 196 - -
Gabi4011g00004 353 Gene3D Potassium Channel Kv1.1; Chain A 21 124 IPR011333 -
Gabi4011g00004 353 Gene3D TAZ domain 197 321 IPR035898 -
Gabi4011g00004 353 SUPERFAMILY POZ domain 24 154 IPR011333 -
Gabi4011g00004 353 Pfam BTB/POZ domain 23 122 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4011g00004 Gabi-Chr4011 57224 60914 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Gabi4011g00004 BTB 3.4e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4011g00004 - - cam:101496955 602.053