Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4007g00003 ATGGGTACCAACTTGCACCAAGTACTCAGAAGCCTCTGTTTCAATACTCATTGGAACTACGCCATCTTTTGGAAGCTCAAACGTCGTGCTCGAATGATCTTGACATGGGAGGATGCTTACTATGACAATCTTCATGATTATGACTCTTCAGGGAACAAGTACTGCCAGAAGACCTTGGAACAGATTGGTAGTAGTCAATTTTCGTATGACGCTATAGGGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCGATAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTGTGCAGATGATCAAGTTACAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACGATTGTTGTTGTAGCTGTAGTCCCACTTGGTGTTGTTCAGCTGGGCTCTCTAAATAAAGTGGTTGAAGATATGGGGGTTGTAACTCATATCAGAAATCTTTTTTTGTCTACGCAAGATTACTCAATAGGCCATGTTTCTAGTCAAAGACAGACTAGTTTGAAAAATTCTTCATCTCTGCCGGATGTATTGAAAGGAAAATTTTGTTCAGATATTATGCCTGCTTGCTTACATGATACAGAGAAAATCATGAAGAGTGAAACAATGGACGTTTCAATGCCCCTTCAATGTTCTGGGAAGAACTATTCACCTCATTCTGCGTATGAGAAAATGGCTGGTAATATGGCCAAGCATGACGGACCTGAATTTTGCGATGATGAAAGTTCCATTTTGCTTCAGTCGATATCCAATATGATGAATATGGAGCATAAGGAATTTGAAGAGATGAGACCTCTAAATAGGAGGAAGTGTGAAGGGGGCAGTAGTGGCTCCAAAGATATGAGGTTGGAATTGAAAAAAAGTATCTCATCATTTTTACACAACTCTGTTAGGGATAATGCTAGCTTCAATGATTTAACATGTCTGTCAGAAAAAGTCAGACTTGATTCCGTTTGCTTTCCTTCAGTTTTTTTTGATGCGCTTGTTTGTGAAAGTGATGAGTTGCATTATGTGGATATTAACCATAAAGGGGTGTTGAATTTCGCCAGACCTTCAGATGCAAACTCCCAAAAGCATATAAAAAAGTCAAAGTTTAAGACTGAGCCTAGTGACAAGGATGCCTCATACAAGTTGAAGTTCCCTGCTGGCTGTGAGCTACACGATGCACTTGGACCAGCTTTTTTGAAAGGAAGTAAATATTTTGATTGGGTGGCACAGGTTAATCAAGATGCGAAAACTGTGGATATACAAGATGAGATTAGTACCAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCAATGATGGCCAACACTTGCCATAGTATTAATGATATTAATAGTGAGTTATCATTTTGTGCATCAATGCAATCTGCATTGGCCTCTGGAAAAAATGCTGAAGCTTCTATTCACAATGTGCATATTGTGGATTCAGAAGGCTGTTCAGTGGACCAGCCCTCTCTTGTCAGAGAGGACAAACACTATTGTCTGAGTTCATCATCAGGGATATGTGGTGTTATGTCCCCAAAAGGTGTTTCATCTACATGTCCTAGTTCATATAGTGAGCAGTTTGAAAGGTCTTCTGAACCAGCTAAGAACAGAAAGAAGAGGGCTAGGCCTGGGGAAAGTTGTAGGCCTCGTCCAAGGGACCGGCAACTGATCCAAGATCGTGTTAAGGAATTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCGCAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAGCATGCTGACAAGCTAACTAAATTTGCTGATACAAAGTCAAAGTTGCATCACATTGAAACAGACATTCTTGGATCCTCTAGTTATGAGCAGGGTTCAAGTTGGGCAATGGAGGTAGGGGGTCATCTCAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAAATGCTTGTTGAGATGCTCTGTGAGGAGTGCAGCCATATTCTTGAAATAGCAGAAGCTATAACAAGCTTGGGCCTTAAAATTTTGAAGGGCGCTACAAAAGCTCATGGTGAAAAGATCTGGATATGCTTTGTTGTTGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTTGCCACTTGTTCAAATACTGCAATCCAAGACCACTATGTGTTCACAATAA 2235 0.4098 MGTNLHQVLRSLCFNTHWNYAIFWKLKRRARMILTWEDAYYDNLHDYDSSGNKYCQKTLEQIGSSQFSYDAIGLAVAKMSYHVYSIGEGIVGQVAVTGKHRWICADDQVTGSGLSFEFADGWQSQFSAGIRTIVVVAVVPLGVVQLGSLNKVVEDMGVVTHIRNLFLSTQDYSIGHVSSQRQTSLKNSSSLPDVLKGKFCSDIMPACLHDTEKIMKSETMDVSMPLQCSGKNYSPHSAYEKMAGNMAKHDGPEFCDDESSILLQSISNMMNMEHKEFEEMRPLNRRKCEGGSSGSKDMRLELKKSISSFLHNSVRDNASFNDLTCLSEKVRLDSVCFPSVFFDALVCESDELHYVDINHKGVLNFARPSDANSQKHIKKSKFKTEPSDKDASYKLKFPAGCELHDALGPAFLKGSKYFDWVAQVNQDAKTVDIQDEISTSQLTSESRPEHLLEAMMANTCHSINDINSELSFCASMQSALASGKNAEASIHNVHIVDSEGCSVDQPSLVREDKHYCLSSSSGICGVMSPKGVSSTCPSSYSEQFERSSEPAKNRKKRARPGESCRPRPRDRQLIQDRVKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTKFADTKSKLHHIETDILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHILEIAEAITSLGLKILKGATKAHGEKIWICFVVEGQNNRNVHRLDILLPLVQILQSKTTMCSQ 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4007g00003 744 MobiDBLite consensus disorder prediction 537 570 - -
Gabi4007g00003 744 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Gabi4007g00003 744 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 742 IPR043561 GO:0003700|GO:0006355
Gabi4007g00003 744 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 558 607 IPR011598 GO:0046983
Gabi4007g00003 744 MobiDBLite consensus disorder prediction 547 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4007g00003 Gabi-Chr4007 48318 54952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4007g00003 1 738 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.827 1.04e-160 481
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4007g00003 - - ccaj:109796613 1165.21