Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4007g00002 ATGGGTACCAACTTGCACCAAGTACTCAGAAGCCTCTGTTTCAATACTCATTGGAACTACGCCATCTTTTGGAAGCTCAAACGTCGTGCTCGAATGATCTTGACATGGGAGGATGCTTACTATGACAATCTTCATGATTATGACTCTTCAGGGAACAAGTACTGCCAGAAGACCTTGGAACAGATTGGTAGTAGTCAATTTTCGTATGACGCTATAGGGTTAGCTGTGGCAAAGATGTCATATCATGTATATTCGATAGGGGAAGGTATTGTTGGACAGGTAGCTGTTACTGGAAAGCATCGGTGGATCTGTGCAGATGATCAAGTTACAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACGATTGTTGTTGTAGCTGTAGTCCCACTTGGTGTTGTTCAGCTGGGCTCTCTAAATAAACAGGTGGTTGAAGATATGGGGGTTGTAACTCATATCAGAAATCTTTTTTTGTCTACGCAAGATTACTCAATAGGCCATGTTTCTAGTCAAAGACAGACTAGTTTGAAAAATTCTTCATCTCTGCCGGATGTATTGAAAGGAAAATTTTGTTCAGATATTATGCCTGCTTGCTTACATGATACAGAGAAAATCATGAAGAGTGAAACAATGGACGTTTCAATGCCCCTTCAATGTTCTGGGAAGAACTATTCACCTCATTCTGCGTATGAGAAAATGGCTGGTAATATGGCCAAGCATGACGGACCTGAATTTTGCGATGATGAAAGTTCCATTTTGCTTCAGTCGATATCCAATATGATGAATATGGAGCATAAGGAATTTGAAGAGATGAGACCTCTAAATAGGAGGAAGTGTGAAGGGGGCAGTAGTGGCTCCAAAGATATGAGGTTGGAATTGAAAAAAAGTATCTCATCATTTTTACACAACTCTGTTAGGGATAATGCTAGCTTCAATGATTTAACATGTCTGTCAGAAAAAGTCAGACTTGATTCCGTTTGCTTTCCTTCAGTTTTTTTTGATGCGCTTGTTTGTGAAAGTGATGAGTTGCATTATGTGGATATTAACCATAAAGGGGTGTTGAATTTCGCCAGACCTTCAGATGCAAACTCCCAAAAGCATATAAAAAAGTCAAAGTTTAAGACTGAGCCTAGTGACAAGGATGCCTCATACAAGTTGAAGTTCCCTGCTGGCTGTGAGCTACACGATGCACTTGGACCAGCTTTTTTGAAAGGAAGTAAATATTTTGATTGGGTGGCACAGGTTAATCAAGATGCGAAAACTGTGGATATACAAGATGAGATTAGTACCAGCCAATTGACTTCTGAATCTCGTCCAGAGCATCTTTTGGAAGCAATGATGGCCAACACTTGCCATAGTATTAATGATATTAATAGTGAGTTATCATTTTGTGCATCAATGCAATCTGCATTGGCCTCTGGAAAAAATGCTGAAGCTTCTATTCACAATGTGCATATTGTGGATTCAGAAGGCTGTTCAGTGGACCAGCCCTCTCTTGTCAGAGAGGACAAACACTATTGTCTGAGTTCATCATCAGGGATATGTGGTGTTATGTCCCCAAAAGGTGTTTCATCTACATGTCCTAGTTCATATAGTGAGCAGTTTGAAAGGTCTTCTGAACCAGCTAAGAACAGAAAGAAGAGGGCTAGGCCTGGGGAAAGTTGTAGGCCTCGTCCAAGGGACCGGCAACTGATCCAAGATCGTGTTAAGGAATTGAGAGAGCTGGTGCCAAATGGAGCAAAGTGCAGTATTGATTCACTACTGGAGCGCGCAATAAAGCACATGCTCTTTCTCCAAAGCATAACTAAGCATGCTGACAAGCTAACTAAATTTGCTGATACAAAGTCAAAGTTGCATCACATTGAAACAGACATTCTTGGATCCTCTAGTTATGAGCAGGGTTCAAGTTGGGCAATGGAGGTAGGGGGTCATCTCAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAAATGCTTGTTGAGATGCTCTGTGAGGAGTGCAGCCATATTCTTGAAATAGCAGAAGCTATAACAAGCTTGGGCCTTAAAATTTTGAAGGGCGCTACAAAAGCTCATGGTGAAAAGATCTGGATATGCTTTGTTGTTGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTTGCCACTTGTTCAAATACTGCAATCCAAGACCACTATGTGTTCACAATAA 2238 0.4102 MGTNLHQVLRSLCFNTHWNYAIFWKLKRRARMILTWEDAYYDNLHDYDSSGNKYCQKTLEQIGSSQFSYDAIGLAVAKMSYHVYSIGEGIVGQVAVTGKHRWICADDQVTGSGLSFEFADGWQSQFSAGIRTIVVVAVVPLGVVQLGSLNKQVVEDMGVVTHIRNLFLSTQDYSIGHVSSQRQTSLKNSSSLPDVLKGKFCSDIMPACLHDTEKIMKSETMDVSMPLQCSGKNYSPHSAYEKMAGNMAKHDGPEFCDDESSILLQSISNMMNMEHKEFEEMRPLNRRKCEGGSSGSKDMRLELKKSISSFLHNSVRDNASFNDLTCLSEKVRLDSVCFPSVFFDALVCESDELHYVDINHKGVLNFARPSDANSQKHIKKSKFKTEPSDKDASYKLKFPAGCELHDALGPAFLKGSKYFDWVAQVNQDAKTVDIQDEISTSQLTSESRPEHLLEAMMANTCHSINDINSELSFCASMQSALASGKNAEASIHNVHIVDSEGCSVDQPSLVREDKHYCLSSSSGICGVMSPKGVSSTCPSSYSEQFERSSEPAKNRKKRARPGESCRPRPRDRQLIQDRVKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTKFADTKSKLHHIETDILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHILEIAEAITSLGLKILKGATKAHGEKIWICFVVEGQNNRNVHRLDILLPLVQILQSKTTMCSQ 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4007g00002 745 MobiDBLite consensus disorder prediction 538 571 - -
Gabi4007g00002 745 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 743 IPR043561 GO:0003700|GO:0006355
Gabi4007g00002 745 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
Gabi4007g00002 745 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 559 608 IPR011598 GO:0046983
Gabi4007g00002 745 MobiDBLite consensus disorder prediction 548 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4007g00002 Gabi-Chr4007 48318 54952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4007g00002 1 739 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.774 5.46e-159 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4007g00002 - - ccaj:109796613 1171.76