Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4003g00073 ATGGAGTTCCTAAGTTGTGTATTTCTCCTTGTGTTGACATTCACTCTTGCACAAGCTTTGCGTTCTCTGCTTTCAAGAGGCAAAAATAATGCAAAGTACAAGCTCCCACCAGGGCCTTCACCTCTTCCTATATTGGGAAACCTCCTTGCATTGGGGAAAAAGCCCCACCAATCACTGGCCAAACTTGCTCATATTTATGGTCCAATAATGAGTCTAAAGTTAGGACAAGTAACCACTATAGTTGTCTCTTCACCAGAAATGGCCAAAGAGGTTCTTCAAACCCATGATCAGTTCTTGTCAAACCGAGCAGTTCCCGAAGCTGCGGCAGTTCACAACCACGAAAAGTATGGCATTGCCTTCTTGCCTGTTTCGCCTCTGTGGAGAGACCTAAGGAAACTATGCAATACTCAGTTATTCTCCAATAAGTCTTTGGATGAAAGTCAAGAACTCAGGCGTAACAAGTTGCAAGAACTCATTCATGATATCCAACAAAGCAGCTTAATTGGTGAAGCAGTAGATATTGGAAGAGCAACTTTCAATACCGCGATTAATTTATTATCAAACACTATTTTCTCTGTAGATTTGTTTCAGTCTGCAGGTTCAGTTGGAGAGTTCAAGAAGTTAATTGTGAATATCATGGAAGAAGGTGGAAAACCAAACTTGGCTGACTTTTTTCCTGCACTAAGGAAGGTTGACCCACAGCGCATTAAGAGTCGCAACGGTTCCTACATTGGGAAGATCATTGACATCAGCAGCCGTTTGGTTGATCAACGGTTGAAGCAAAGGGAAGTTCAAGGTTTTGACACAAACAATGACATGCTGAATACCTTGCTCAACATTGCTCAAGACAACACTCAAGAGATGGACAGAACCCAAATTGAACATTTATCTCTGACCCTATTTCTCGGGGGAACGGATACAATTAAATCAACGGTAGAATGGACAATGGCAGAATTACTCAAAAATGAAAAGGCTATGTCAAAAGTGAAACAAGAGTTGGAGCAAACCATTGGCAAAGGTAAACATGTTGAGGAATCAGATATTGCAAGGCTTCCTTATTTACAAGCTGTAATAAAGGAGACCTTACGATTGCACCCTCCCGTCCCATTTTTAATCCCACGGAAAGCCATTGCAAATGTGGAGATTAGTGGCTACACAATCCCAAAAGATGCAAACGTGCTAGTCAATGTGTGGGCTATTGGCAGAAATTCAAGTATCTGGAAGAATGCAAATGTGTTTTCACCAGAGAGGTTCTTAAGCTCAGAAATTGATGTTAATGGTCGCCATTATGAGCTAACACCATTTGGTTCTGGCCGTCGAATTTGTCCTGGCTATCCGTTGGCCTTGAGGATGCTGTATTTGATGTTGGGTTCACTACTCAACTGTTTTGACTGGAAACTTGAAGATGGTGTGAAAATAGATGATATGAACATGGACGACAACTTTGGTCTAACTTTAGGAAAGGCTCAACCTGTGAGAATTATTCCAGAGAAAATAAGCAATTCATGTCTCTGA 1515 0.4145 MEFLSCVFLLVLTFTLAQALRSLLSRGKNNAKYKLPPGPSPLPILGNLLALGKKPHQSLAKLAHIYGPIMSLKLGQVTTIVVSSPEMAKEVLQTHDQFLSNRAVPEAAAVHNHEKYGIAFLPVSPLWRDLRKLCNTQLFSNKSLDESQELRRNKLQELIHDIQQSSLIGEAVDIGRATFNTAINLLSNTIFSVDLFQSAGSVGEFKKLIVNIMEEGGKPNLADFFPALRKVDPQRIKSRNGSYIGKIIDISSRLVDQRLKQREVQGFDTNNDMLNTLLNIAQDNTQEMDRTQIEHLSLTLFLGGTDTIKSTVEWTMAELLKNEKAMSKVKQELEQTIGKGKHVEESDIARLPYLQAVIKETLRLHPPVPFLIPRKAIANVEISGYTIPKDANVLVNVWAIGRNSSIWKNANVFSPERFLSSEIDVNGRHYELTPFGSGRRICPGYPLALRMLYLMLGSLLNCFDWKLEDGVKIDDMNMDDNFGLTLGKAQPVRIIPEKISNSCL 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4003g00073 504 CDD CYP76-like 63 496 - -
Gabi4003g00073 504 Coils Coil 316 336 - -
Gabi4003g00073 504 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 Gene3D Cytochrome P450 22 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 FunFam Cytochrome P450 76C4 27 495 - -
Gabi4003g00073 504 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 Pfam Cytochrome P450 36 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Gabi4003g00073 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00073 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4003g00073 Gabi-Chr4003 637655 640244 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4003g00073 3 498 Cytochrome P450 AT2G45550 46.016 2.92e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4003g00073 - - vvo:131607027 665.611