Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4003g00070 ATGGAGTTCCTCAGTTGTGTACTCCTCCTTGTGTTGACTTTCACTCTTGCACAAGCTTTGCGTTCTCTGCTTTCAAGAGGCAAAAATAATGCAAAGTACACGCTCCCACCAGGACCTTCACCTCTTCCTATATTGGGAAACCTCCTTGCATTGGGCAAAAAGCCCCACCAATCACTGACCAAACTCGCTCATATTTATGGCCCAATAATGAGTCTAAAGTTAGGACAAGTAACCACTATAGTTGTCTCTTCACCAGAAATGGCCAAAGAGGTTCTTCAAACTCATGATAAGTTCTTGTCAAACCGTGACGTTCCCCATGCTGCGGAAGTTCACAACCACAACAAGCATAGCATGGCCTTCTTGCCTGTTTCACCTCTGTGGAGAAACCTAAGGAAACTAAGCAATACACAGTTACTCTCCAACAAGTCTTTGGATGAAAGTCAAGACCTCAGGCGTAACAAGCTGCAAGAACTCCTTCATGATATACAACAAAGCAGCTTAATTGGTGAAGCAGTTGATATTGGAAGAGCAACTTGCAATACCGCAATTAATTTATTATCAAACACTATTTTCTCTGTAGATTTGTTTCAGTCTGCAGGTTCAGCAGGAGATTTCAAGGAGTTAGTGAAGCATATCATGCAAGAGGCTGGAAAACCAAACATGGCTGACATTTTTCCCGCACTGAAGAAGCTTGACCCACAGCGCATTTATAGTCGCAACCGTTTTTATGCTGGGAAGGTCATAGACATCTTCCGCCGTTTGGTTGATCAACGGTTGAAGCAAAGGGAAGTTCAAGGTTTTGACACAAACAATGACATGCTGAATACCTTGCTCAACATTGCTCAAGAGAACACCCAAGAGATGGACACAACCAAAATTGAACACTTATCCCTGTCTCTATTTATCGGGGGAACGGATCCAGTTACGACTACGCTAGAATGGGCAATGGCAGAGTTACTCCAAAATGAAAAGGCAATGGAAAAAGCAAAACAAGAGCTGGAGCAAACCATTGGGAAAGGTAAACCCGTTGAGGAATCAGATCTTGCTAGGCTTCCTTATGTACAAGCCGTAATAAAAGAGACCTTCCGATTGCACCCTCCAATCCCATTTTTATTCCCACGGAAAGCTGATGAAAATGTGGAAATTTGTGGCTACACAATCCCAAAAGGTGCAAGGGTGCTAGTTAATGTGTGGGCTATTGGCAGAGATTCAAGTAGTTGGGAAAATGCAAACGTGTTTTCACCCGAGAGGTTCTTAAGCTCTGAAATTGATGTTAATGGTCGCCATTATGAGCTAACACCATTTGGTTCTGGCCGTCGAATTTGTCCTGGCTTGTTGTTCGCCATGAGGATATTGTATTTGATGTTGGGTTCACTAATCAACTGTTTTAACTGGAGACTTGAAGATGGTATGACAATAGAAGACATGAACATGGAAGACAAATTTGGGCTAGCTTTAGCAAAGGCTGAACCCGTCAGAATTATTCCAGAGAAAATTAGCAATTAA 1506 0.4263 MEFLSCVLLLVLTFTLAQALRSLLSRGKNNAKYTLPPGPSPLPILGNLLALGKKPHQSLTKLAHIYGPIMSLKLGQVTTIVVSSPEMAKEVLQTHDKFLSNRDVPHAAEVHNHNKHSMAFLPVSPLWRNLRKLSNTQLLSNKSLDESQDLRRNKLQELLHDIQQSSLIGEAVDIGRATCNTAINLLSNTIFSVDLFQSAGSAGDFKELVKHIMQEAGKPNMADIFPALKKLDPQRIYSRNRFYAGKVIDIFRRLVDQRLKQREVQGFDTNNDMLNTLLNIAQENTQEMDTTKIEHLSLSLFIGGTDPVTTTLEWAMAELLQNEKAMEKAKQELEQTIGKGKPVEESDLARLPYVQAVIKETFRLHPPIPFLFPRKADENVEICGYTIPKGARVLVNVWAIGRDSSSWENANVFSPERFLSSEIDVNGRHYELTPFGSGRRICPGLLFAMRILYLMLGSLINCFNWRLEDGMTIEDMNMEDKFGLALAKAEPVRIIPEKISN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4003g00070 501 CDD CYP76-like 63 496 - -
Gabi4003g00070 501 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 497 - -
Gabi4003g00070 501 FunFam Cytochrome P450 76C4 27 495 - -
Gabi4003g00070 501 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 Gene3D Cytochrome P450 23 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Gabi4003g00070 501 Pfam Cytochrome P450 36 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00070 501 Coils Coil 312 339 - -
Gabi4003g00070 501 SUPERFAMILY Cytochrome P450 36 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4003g00070 Gabi-Chr4003 591899 595042 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4003g00070 8 498 Cytochrome P450 AT2G45550 44.980 2.59e-152 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4003g00070 - - vvo:131607027 655.595