Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4003g00064 ATGGAGTCAGTGAGTAGTTGTATACTGCTATTCCTGTTGATTTGCATAATTTCACTGCTTGTAAGAGGCAGATCAAAACCAAACCCAAAACATCCACCAGGTCCTTCCCCTCTTCCCATCATTGGAAACCTCATTGAACTAGGGAAAAAGCCACACCAATCTTTGGCCAAGCTAGCTATGATGCATGGCCCTGTAATGAAGTTAAAGCTAGGCCAAATAACCACAGTAGTAATCTCTTCAGCAGAAATGGCCAAAGAGGTGCTTCAAACCCATGACCAATTCTTCTCAAATCGATCCGTTCCCCACTCAGTAACAATTTGCAACCACGAACCCTATGGCCTGGCCTTCATGCCCGTGTCACCTCTTTGGCGAGAGTTAAGGAAAATATGCAGCACTGAATTGTTGTCACAAAAGACTCTTGATGGCAGCAAAGACCTCAGGCGTAAGATAGTTCAACAACTCATCAATGAAATCCAACAAAGCAGCCAAATCGGTGAAGCAGTAGAAATTGGCAAGTCAGTTTTCAAGACTACCATAAATTTATTGTCCAACACTATATTCTCACAGGACATGGTTCACTCTACAAGTAACGCATTCGATTTCAAGGATTTAGTGACCAATATCACAAAACTTGTTGGAACACCAAACTTGTCAGATTACTTTCCTGTGTTGAAGATGTTTGACCCACAGAGAATATTCAAGCACCAGTCAACCAACACCAACAAGGTGTTAACCATCTTCAATCGTTTGGTTAACCAAAGGATTATGCAGAGGTCCAGCACCGGTTTTGATGCCAGTAACGACATGTTAGCCGCTCTGCTCAACATTTGTCAAGAGAACAAGTTGATGAACAATACAGTCATTGAACATTTGTTTTTCGATTTGTTTATTGCGGGAACAGATACAACAACGTCAACATTAGAATGGGCAATGACTGAGTTACTCCATAACCCAAATGTCATGTTAAAAGCAAAACAAGAGCTTGACCAAACTATTGGCAAAGGCAAACTCATTGAAGAGTCAGACATAGCTAGACTCCCATATTTACAAGCAATAATTAAAGAAACCTTCCGCTTGCATCCGCCGGTACCATTTTTACTTCCACGAAAAGCTGCGAGAGATGTCAACATCAATGGTTACACCGTCCCAAAAGATGCTCAAGTGCTAATCAATGTGTGGAAAATTGGTAGGGATCCAAAGACATGGGATAGTCCAAATATATTTTTACCGGAAAGGTTTTTAGAGTCTAAGATTGATGTCAAAGGCCAACATTTCGAGCTTACACCTTTTGGTGGTGGTCGGAGAATATGTCCTGGCACACTGTTGGCTACGAGGATGTTGCTCTTGATGTTAGGCTCATTAATCAACTCTTTTGATTGGAAGCTTGAAGATGGTTTGGAATCAGAGAATATGGACATGGATGAAATATTTGGTATTACCTTACAAAAGGCTATACCATTGCGGGTTGTTCCCATCAAAATATGA 1485 0.4114 MESVSSCILLFLLICIISLLVRGRSKPNPKHPPGPSPLPIIGNLIELGKKPHQSLAKLAMMHGPVMKLKLGQITTVVISSAEMAKEVLQTHDQFFSNRSVPHSVTICNHEPYGLAFMPVSPLWRELRKICSTELLSQKTLDGSKDLRRKIVQQLINEIQQSSQIGEAVEIGKSVFKTTINLLSNTIFSQDMVHSTSNAFDFKDLVTNITKLVGTPNLSDYFPVLKMFDPQRIFKHQSTNTNKVLTIFNRLVNQRIMQRSSTGFDASNDMLAALLNICQENKLMNNTVIEHLFFDLFIAGTDTTTSTLEWAMTELLHNPNVMLKAKQELDQTIGKGKLIEESDIARLPYLQAIIKETFRLHPPVPFLLPRKAARDVNINGYTVPKDAQVLINVWKIGRDPKTWDSPNIFLPERFLESKIDVKGQHFELTPFGGGRRICPGTLLATRMLLLMLGSLINSFDWKLEDGLESENMDMDEIFGITLQKAIPLRVVPIKI 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4003g00064 494 Gene3D Cytochrome P450 18 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 59 78 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 437 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 83 104 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 427 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 9 493 - -
Gabi4003g00064 494 FunFam Cytochrome P450 76C4 23 490 - -
Gabi4003g00064 494 SUPERFAMILY Cytochrome P450 32 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 CDD CYP76-like 62 491 - -
Gabi4003g00064 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 430 439 IPR017972 GO:0005506|GO:0016705
Gabi4003g00064 494 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS P450 superfamily signature 437 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 PRINTS P450 superfamily signature 428 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00064 494 Pfam Cytochrome P450 32 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4003g00064 Gabi-Chr4003 545158 547101 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4003g00064 10 493 Cytochrome P450 AT2G45550 46.493 1.88e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4003g00064 - - gmx:100805772 660.603