Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4003g00052 ATGAAGGATGCAGATGTGTCAAAGCAGATCCAACAGATGATTAGGTTCATCCGCCAAGAAGCTGAGGAGAAAGCTAATGAAATATCTGTCGCTGCTGAGGAGGAATTCAATATTGAGAAACTGCATTTACTCGAAGCTGAAAAGAGAAAGATCAGACAAGAGTACGAGCGAAAAGCCAAACAAATTGATGTTCGCAGAAAGATTGAATACTCAATGCAGCTGAATGCATCCCGTATAAAAGTACTTCAAGCACAAGATGAGGCTGTGAATTCTATGAAGGATGCTGCTAAAAAGGCGCTTTTACGTGTCTCGAATGATAAGAAAGCATATAAGAAACTCATGAAAGACATGATTGTTCAGGGTTTAATGCGCCTGAGGGAACCATCAGTGATACTACGATGCAGAGAGGGTGACCGTAAGCTAGTTGAGTCATTGCTAGAGGAAGCCAAAAAAGAATACTCGGAGAAAGCCAACTTGCAATCCCCTAAGATTACCCTTGATGATCGTGTTTACCTCCCACCATCTCCAAAAAACAGTGCCGTGGATTCCCATGAACCTTTTTGCTCCGGAGGAGTAGTATTGGCCTCGGAGGATGGGAAGATAGTGTTGGAAAACACCCTTGATGCGCGACTGGATGTCATTTTCCGACAGAAACTGCCTCAGATACGGAAGCGCCTGTTAGGTTGA 687 0.4381 MKDADVSKQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLHLLEAEKRKIRQEYERKAKQIDVRRKIEYSMQLNASRIKVLQAQDEAVNSMKDAAKKALLRVSNDKKAYKKLMKDMIVQGLMRLREPSVILRCREGDRKLVESLLEEAKKEYSEKANLQSPKITLDDRVYLPPSPKNSAVDSHEPFCSGGVVLASEDGKIVLENTLDARLDVIFRQKLPQIRKRLLG 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4003g00052 228 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gabi4003g00052 228 SUPERFAMILY V-type ATPase subunit E-like 87 227 - -
Gabi4003g00052 228 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Gabi4003g00052 228 Coils Coil 41 61 - -
Gabi4003g00052 228 Gene3D - 1 62 - -
Gabi4003g00052 228 Coils Coil 7 34 - -
Gabi4003g00052 228 Gene3D - 92 228 IPR038495 -
Gabi4003g00052 228 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4003g00052 Gabi-Chr4003 367641 369803 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4003g00052 1 228 Primary Pumps ATPases(2) AT3G08560 71.053 1.29e-117 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4003g00052 K02150 - gmx:100779392 405.216