Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4003g00017 ATGGCTCTTGCTTGGAATTTAGCCATTGCTTTAGTACTTCTTGCCCTGCAACAATCTTGTTTTTGTGTGGCCTCTACGTCAAGCAATGTTCATATTGTGTATATGGGTGACAGAATCCACCAGAGTGAGCAACACCTAGTTGAAGACTCCCACCTTGACATACTTTCACATATTCTTGGAAGCAAAAGCGCGGCTAAGAAGTCCATCCTGTATAGCTATAAGCATGGTTTTTCTGGATTTGCAGCAGTTTTACGTCAGTCTCAAGCTAAGCTTCTTGCAGATTTCCCAGGAGTTGTCCGTGTGATTCCAAACAGAATTCTTAGTCTTCACACAACAAGAAGTTGGGATTTCTTGAACGTCAAGCAGGATATAGTGACTGGTGTTCTTTCTAGGGGTCAATCTGGAAAAGGCACCATCATTGGCATCCTGGACACTGGTATTTGGCCCGAGTCTGAGAGCTTTAGAGAAGACCACATGGATAATCCTCCTCCTCGTTGGCGCGGTATATGCCAAGTAGGAGATAACTTTGACCGCTCCCACTGTAATAGGAAAATTATCGGTGCACGCTGGTATATCAAAGGGTATGAAGCTGAATTTGGTAAACTAAATTCAAGTGATGGGGTAGAGTACTTATCTCCCCGAGACGCATCAGGACATGGAACTCACACGGCATCAACTGCAGCTGGTGCTCTAGTAGAAAATGCAAGCTTCATGGGACTAGCTAAAGGATCAGCAAGAGGTGGTGCTCCATCAGCTTGGTTAGCTATCTACAAAATTTGTTGGTCTACTGGGGGCTGCAGTTCTGCTGACCTTCTTGCAGCATTTGATGATGCAATATTTGATGGAGTAGACATTATTTCAGCATCTCTTGGCTCATATCCTCCACTTCCTACTTATGTTGAGGATGTTCTTGCCATTGGTTCCTTCCATGCTGTAGCTAAAGGAATCTCTGTAGTATGCTCTGGTGGCAATTCTGGCCCATATACTCAAACTGTTATAAATACTGCCCCATGGGTTATTACCGTTGCTGCCAGCACCATCGACAGGGAATTTCCATCTAGATTTATCTTGGGAAACAATCAAACTCTACAGGGTCAGAGTTTATATACGGGGAAAGATTTGAGCAAGTTTTATCCTATAGTGTACGGAGAAGACATAGCAGCTTCGGATGCAGATGAAGAAAGTGCAAGAAGCTGCAATTCTGGAAGCCTCAATGCCACCTTAGCTAAAGGAAAAGCAATTCTGTGTTTCCAGTCTCCGTCACAGAGGTCAGCCACTGTTGCTATAAACACTGTAACGGAAGTTGAGGGTGTTGGTCTCATATTTGCTCAGTTTCCCACTAAGGATGTTACTATATCGGGGAGTAAGCCCTCTGCCCAAGTTGACTTCATAACTGGAACTACAATTCTATCATATATGGAAGCAACTAGGAATCCTGTAATCAAGTTTAGCAAGACCAAAACAGTTGTTGGGCAACAGATATCCCCGGAAGTGGCATTCTTCTCTTCCCGAGGACCAAGTTCTCTTTCTCCTTCAGTGTTGAAGCCTGACATTGCTGCTCCTGGAGTTGATATTCTGGCGGCATGGTCACCTGCTTCTTCTGCCCGGGTGCTATCTGATGCAAATCAAGATGAGTTACCTCCTCTTAACTTCAACATTGAATCAGGAACTTCCATGGCATGCCCCCACATAACAGGTATTTTGGCACTTATAAAGACTATCCATCCAACTTGGAGCCCTGCTGCAATCAAGTCTGCACTTATCACAACAGCTTCTGTGAAAAATGAATACAATCAATATATTGGAGCTGAGGGAGCACCACATAAACAAGCTGACCCATTTGACTATGGTGGTGGTCATGTTGATCCTAACAAAGTGACAGATCCTGGTCTTGTATATGACTTGGAAACCTCAGATTACTTTCTTTTCTTATGTTCTATGGGCTACAATGACACTGCCATAAGTTTATTAACAGGGTATCCTACCAAGTGCCGTAAATCACACAAGTTCCTGTTGAATATGAACCTGCCTTCTATAACTGTTCCCGAGCTTAAGCAAACCTTGACGGTATCAAGAACAGTCACTAATGTTGGCCCAATTAAATCGGTCTACATTGCTCGTGTTGTAGCTCCAATTGGCATATCAGTAACAGTTGAGCCATCAATCTTAACGTTTAGTTCTAAACGAAAGAAAATGAAATTCAAGGTAACGTTTTCTTCGAAGCTACGAGTTCAAAGCAGATTCTCATTTGGGTACTTGTTCTGGGAAGATGGGTTACATCAAGTGAGGATACCATTGGCTGTCCGATCTATAGTAGAAGAACTTTATGCAGAAACATAA 2340 0.4321 MALAWNLAIALVLLALQQSCFCVASTSSNVHIVYMGDRIHQSEQHLVEDSHLDILSHILGSKSAAKKSILYSYKHGFSGFAAVLRQSQAKLLADFPGVVRVIPNRILSLHTTRSWDFLNVKQDIVTGVLSRGQSGKGTIIGILDTGIWPESESFREDHMDNPPPRWRGICQVGDNFDRSHCNRKIIGARWYIKGYEAEFGKLNSSDGVEYLSPRDASGHGTHTASTAAGALVENASFMGLAKGSARGGAPSAWLAIYKICWSTGGCSSADLLAAFDDAIFDGVDIISASLGSYPPLPTYVEDVLAIGSFHAVAKGISVVCSGGNSGPYTQTVINTAPWVITVAASTIDREFPSRFILGNNQTLQGQSLYTGKDLSKFYPIVYGEDIAASDADEESARSCNSGSLNATLAKGKAILCFQSPSQRSATVAINTVTEVEGVGLIFAQFPTKDVTISGSKPSAQVDFITGTTILSYMEATRNPVIKFSKTKTVVGQQISPEVAFFSSRGPSSLSPSVLKPDIAAPGVDILAAWSPASSARVLSDANQDELPPLNFNIESGTSMACPHITGILALIKTIHPTWSPAAIKSALITTASVKNEYNQYIGAEGAPHKQADPFDYGGGHVDPNKVTDPGLVYDLETSDYFLFLCSMGYNDTAISLLTGYPTKCRKSHKFLLNMNLPSITVPELKQTLTVSRTVTNVGPIKSVYIARVVAPIGISVTVEPSILTFSSKRKKMKFKVTFSSKLRVQSRFSFGYLFWEDGLHQVRIPLAVRSIVEELYAET 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4003g00017 779 Pfam Subtilase family 135 595 IPR000209 GO:0006508|GO:0008236
Gabi4003g00017 779 ProSiteProfiles Serine proteases, subtilase domain profile. 114 627 - -
Gabi4003g00017 779 FunFam Subtilisin-like protease SBT5.3 21 110 - -
Gabi4003g00017 779 CDD PA_subtilisin_like 355 482 - -
Gabi4003g00017 779 Pfam Fibronectin type-III domain 673 768 IPR041469 -
Gabi4003g00017 779 Gene3D - 348 490 - -
Gabi4003g00017 779 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 110 IPR037045 -
Gabi4003g00017 779 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
Gabi4003g00017 779 Gene3D - 644 772 - -
Gabi4003g00017 779 FunFam Subtilisin-like protease SBT1.5 644 771 - -
Gabi4003g00017 779 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 768 IPR045051 -
Gabi4003g00017 779 CDD Peptidases_S8_3 109 592 IPR034197 -
Gabi4003g00017 779 Gene3D Peptidase S8/S53 domain 137 640 IPR036852 GO:0004252|GO:0006508
Gabi4003g00017 779 SUPERFAMILY Subtilisin-like 109 631 IPR036852 GO:0004252|GO:0006508
Gabi4003g00017 779 Pfam Peptidase inhibitor I9 30 110 IPR010259 -
Gabi4003g00017 779 PRINTS Subtilisin serine protease family (S8) signature 135 154 IPR015500 -
Gabi4003g00017 779 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Gabi4003g00017 779 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Gabi4003g00017 779 FunFam subtilisin-like protease SBT1.5 348 490 - -
Gabi4003g00017 779 FunFam Subtilisin-like protease SBT1.5 137 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4003g00017 Gabi-Chr4003 95872 103082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4003g00017 9 778 Subtilisin-like Serine Gene Family AT4G10540 47.066 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4003g00017 - - gmx:100775442 1316.98