Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4003g00014 ATGGAGTTCCTTCCTCAGTCCCTCCAATCTTCAGCCATTCTTTTTCTTCTCTTATCTCTCTCAGCTTTCATTTTCTTCTTGCTTCGCCTACATAGAAAACTCCCATACCCACCGGGCCCAAAAGGGCTACCCATCATAGGGAACATGTTAATGATGGACCAACTCACCCACCGTGGCTTGGCTCGGCTCTCTGAACGTTACGGTGGGCTTTGCCACCTACAAATGGGCACACTCCACATAGTTGCCGTGTCCACACCGGAAATGGCCCGTGAAGTTCTACAGGCCCAAGATGGCGTTTTCTCAAACCGGCCCGCGAACGTTGCGATCACCTACTTGACCTACGACCGGGCCGACATGGCCTTTGCGAATTACGGCCCGTTTTGGCGGCAGATGCGTAAGATCTGTGTGATGAAGCTATTCAGCCGTAAACGGGCCGAATCGTGGGCTTCCGTACGAGAGGAGGTCGAAGGAACGGTTCGAACCGTAGCAGGGAAAGCCGGTTCGCCGATTAACTTGGGTGAGCTGGTTTTCGCTCTAACTAGGAGCATCACTTTCAAGGCAGCGTTTGGGGCCAGTTTGAACGAAGGGCAAGAGGAATTCATGGGAATCTTGCAAGAGTTTTCGAAGCTCTTCGGAGCTTTCAACATTGCGGATTTTATTCCATGGTTGGGTTGGTTTCATGCACAAGAGTTTAATAAGAGAATGGTCAATGCAAGACAAGCACTTGATGTGTTTATTGACAAGATCATTGACGATCATGTGGCAAAGAGGAAGAACAACATGGAGAAAAAGGGTGAGAACGAAGCAGATACAGATATGGTGGATGAGCTCATGGTTTTTCTTATTGAAGGAGATGGTGGTGATAGTACTCATTCGGACAATTCACAATTGGCCCTTAAGCTTACCAGGGACAACATCAAAGCTCTTATCATGGATGTAATGTTTGGTGGAACTGAGACTGTAGCATCGGTGATAGAATGGACCATGGCAGAACTCATGAAGAGCCCAATGGATCTCCAAAAGGTCCAACAAGAGCTCACGGATATTGTGGGTTTAGACCGAAGATTCACCGAATCTGATCTCGAAAAATTGACTTATCTCAAATGTGTGGTCAAAGAAACCTTGAGGCTCCACCCTCCGATTCCCCTCCTTCTCCACGAGACCGCAGAGGACAGTGTCGTCGCAGGTTACTCTATCCCAACAGGAACACGTGTTTGGATCAACGCGTGGGCCATTGGCCGTGACAAGAGCGCGTGGGATGAACCAGAAACATTTAAGCCGTCAAGGTTCTTGAATGATGGCATGCCAGATTTCAAAGGAAGCAACTTCGAGTTCCTTCCTTTTGGGTCAGGGAGAAGATCATGCCCAGGGATGCAACTTGGACTCTATGCTGTGGAAATGACTGTGGCTCACTTGCTTCATTGTTTCGAGTGGGAGTTACCCAATGGAATGAAGCCAAGTGAGCTTGATATGAATGATGTGTTTGGCCTCACTGCTCCAAGAGCAGTTCAACTTGTTGCGGTACCCAGTTATCGTCTGAATTGTACCCTTGATGAGTCTTTTTAG 1566 0.4828 MEFLPQSLQSSAILFLLLSLSAFIFFLLRLHRKLPYPPGPKGLPIIGNMLMMDQLTHRGLARLSERYGGLCHLQMGTLHIVAVSTPEMAREVLQAQDGVFSNRPANVAITYLTYDRADMAFANYGPFWRQMRKICVMKLFSRKRAESWASVREEVEGTVRTVAGKAGSPINLGELVFALTRSITFKAAFGASLNEGQEEFMGILQEFSKLFGAFNIADFIPWLGWFHAQEFNKRMVNARQALDVFIDKIIDDHVAKRKNNMEKKGENEADTDMVDELMVFLIEGDGGDSTHSDNSQLALKLTRDNIKALIMDVMFGGTETVASVIEWTMAELMKSPMDLQKVQQELTDIVGLDRRFTESDLEKLTYLKCVVKETLRLHPPIPLLLHETAEDSVVAGYSIPTGTRVWINAWAIGRDKSAWDEPETFKPSRFLNDGMPDFKGSNFEFLPFGSGRRSCPGMQLGLYAVEMTVAHLLHCFEWELPNGMKPSELDMNDVFGLTAPRAVQLVAVPSYRLNCTLDESF 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4003g00014 521 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS P450 superfamily signature 446 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 FunFam Cytochrome P450 84A1 29 511 - -
Gabi4003g00014 521 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS E-class P450 group I signature 455 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS E-class P450 group I signature 408 432 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PRINTS E-class P450 group I signature 445 455 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 PANTHER CYTOCHROME P450 84A1-RELATED 2 517 - -
Gabi4003g00014 521 CDD CYP71-like 66 505 - -
Gabi4003g00014 521 Pfam Cytochrome P450 37 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 Gene3D Cytochrome P450 30 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 SUPERFAMILY Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4003g00014 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 448 457 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4003g00014 Gabi-Chr4003 59575 63103 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4003g00014 44 517 Monolignol Biosynthesis Gene Families AT4G36220 68.565 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4003g00014 K09755 - zju:107426594 754.977