Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00073 ATGCATACCATTGCAAGCCTCTTGCTTTCTCTTGTTTGTATCTCTGTTTCATTAAATGGCATTAATGCTGCACCTATAGAGGACCCAGGGTCATTGATCTTGGATTGTGGGTTGGAAGAAGGTGGTGCCAAGGATGGTGATGGAAGGCAATGGAGCCCTGATAATAAGTTCCTGGTAGAAGGTACAAATTCATTCACATCCAAAGCCTCCTACCAAGACCCTTCCGTTTTGTCTGAGGTTCCATACATGTCAGCTCGAGTTTTCACATCCGAGGCAACATACAAATTCCCTGTTCAACCTGATAAGCGCTATTGGCTCAGGCTCCATTTTTATCCCTCTCTTTATGGCAGTTTCAACCCCTCCGATTCATATTTCTCCGTGACTGCAAATGGGGTTACGCTCCTCAGCAATTTCAGCGCCTCAATCACTTGTGAGGCCCTCTCACAAGCTTACATTGACAGAGAGTATTCCCTTGCACCTTTGAATTCAGATAGTTTGACTCTTACCTTCAAGCCTTCTGACAAGTACAACGGGGCTTTTGCTTTTGTCAATGGCATTCAGTTGATCCAAATGCCCGAGTTGTTTGATTCAGCTGCATTGGTCGGGTACACTGAGCAAACCGTGGACGTCAAAAGTTTGAATTTGCAAACCATGTTCAGACTAAACGTTGGTGGACAGTATATATCTCCAACACAAGACTCTGGCCTTACAAGGATGTGGTACGATGACACACCTTACCTTTATGGTGCAGCCACTGGTGTCACCAACCAAGCTACCAAGGATGTCAAAATCAACTACCAGACCATGCCACAGTACATTGCTCCTTCTGATGTCTACTCCACGTCAAGATCAATGGGTACCAATAAGGATGTAAACATGGGCTACAATCTCACGTGGATTTTCCAAGTTGATCCAAATTCCATGTACCTGGCGAGGTTGCATTTCTGTGATTACTATTATTCCAAAGTTAACGAGATTGTTTTCAATATCTTCGTGAACAACCAAACAGCACAAGCTCAAGCTGATGTGAATGGGTGGACAGGAGGCAAAGGTGTGCCAACTTACAAGGACTATGTTGTATATGTCCAAGATGGGGAGGGAGATGAGCAGCTCTGGCTTGCTCTTCATCCAGCACCTGATACAAAGCCAGAGTTTTATGATGCCATACTCAATGGGGTGGAGATATTCAAGCTCAATGACACAGACTTGTCTGGCCCCAATCCTCAGCCTTCGGACATGCTCCTCAAGCATGAAGAGGAAACGAGTTTCCAAAACCACAAAGCATATGATAAGAATGTCATTATTGGTGGAGCTGCTGGAGGTGCTGCAGGTTTTGCGTTAATGGCTGCAATATGCGTTGCTGTCTACCACAAGAAGAAGAGACTTCCGGGGTCACACACGCACACAAGCTGGCTGCCCATCTATGGGAACTCAAGCTCAACTGGCAGCAAATCCACCATATCTGGGAAGAGCTATGGTAGTGCCAACCTATCCGCCGGGGCTCAAGGTCTTTGCCGCTATTTCTCCTTACAAGAGATAAAGCAAGCAACCAAGAATTTTGATGAGTCCAACGTCATTGGTGTTGGTGGATTTGGAAAGGTTTACAAGGGTGTTATTGATAGTGGAATGAAAGTGGCAATTAAGAGGTCGAACCCACAATCAGAACAAGGAGTTAATGAATTCCGGACTGAAATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATGGGATTTTGCGAGGAAGATGATGAGATGTGTCTGGTTTATGACTACATGGCTCTCGGCACCTTTAGGGAACATCTATACAAGGGCAACAAGCCTGTGTCTACTCTATCATGGAAGCAAAGGCTGGAGATCTGCATTGGAGCTGCAAGAGGGCTTCACTACCTTCACACAGGGGCTAAGTACACCATCATTCATAGAGATGTCAAAACAACAAACATTCTCTTGGATGAAAACTGGGCTGCCAAGGTTTCGGATTTTGGGTTGTCAAAAACGGGTCCAGATATGAAAAATGGTCATGTTAGTACAGTGGTGAAGGGCAGTTTTGGCTACTTGGATCCTGAATACTTCAGGAGGCAACAGTTGACTGAGAAGTCTGATGTCTACTCATTTGGGGTTGTTCTGTTTGAAGCCCTCTGTGCCAGGCCTGTTCTAAATCCTAGCCTTCCAAAGGAACACGTTAGTCTTGCGGAATGGGCATTGCTCTGCAAACAAAAAGGAACACTGGAGGATATTATTGACCCCCATATCAAAGGACAGATTCATCCAGAAAGCTTGAAGAAGTTTGCAGACACAGCTGAAAAGTGCTTGTCTGATCATGGAGGTGATCGTCCCTCCATGAATGATCTGCTGTGGAATCTTGAATTTGCTCTCAACCTGCAAGAAAACCGTGATGGTTCAACTCACTCTGCACGTGTTGACCAAAGTGAGTTTGAAGAAATAAGCTTGGGAAATACCGACATGGCAAGCCATTATAAAAACCTGAGCCTTGGAAGTGAGTATGAGCATGAGCTTAGCCAGGATTCCATTGAGAATTCGACTGCTGCTATCTTCTCACAATTTGTCAATCAAAATGGACGATGA 2598 0.4507 MHTIASLLLSLVCISVSLNGINAAPIEDPGSLILDCGLEEGGAKDGDGRQWSPDNKFLVEGTNSFTSKASYQDPSVLSEVPYMSARVFTSEATYKFPVQPDKRYWLRLHFYPSLYGSFNPSDSYFSVTANGVTLLSNFSASITCEALSQAYIDREYSLAPLNSDSLTLTFKPSDKYNGAFAFVNGIQLIQMPELFDSAALVGYTEQTVDVKSLNLQTMFRLNVGGQYISPTQDSGLTRMWYDDTPYLYGAATGVTNQATKDVKINYQTMPQYIAPSDVYSTSRSMGTNKDVNMGYNLTWIFQVDPNSMYLARLHFCDYYYSKVNEIVFNIFVNNQTAQAQADVNGWTGGKGVPTYKDYVVYVQDGEGDEQLWLALHPAPDTKPEFYDAILNGVEIFKLNDTDLSGPNPQPSDMLLKHEEETSFQNHKAYDKNVIIGGAAGGAAGFALMAAICVAVYHKKKRLPGSHTHTSWLPIYGNSSSTGSKSTISGKSYGSANLSAGAQGLCRYFSLQEIKQATKNFDESNVIGVGGFGKVYKGVIDSGMKVAIKRSNPQSEQGVNEFRTEIEMLSKLRHKHLVSLMGFCEEDDEMCLVYDYMALGTFREHLYKGNKPVSTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWAAKVSDFGLSKTGPDMKNGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLNPSLPKEHVSLAEWALLCKQKGTLEDIIDPHIKGQIHPESLKKFADTAEKCLSDHGGDRPSMNDLLWNLEFALNLQENRDGSTHSARVDQSEFEEISLGNTDMASHYKNLSLGSEYEHELSQDSIENSTAAIFSQFVNQNGR 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00073 865 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Gabi3995g00073 865 Gene3D Phosphorylase Kinase; domain 1 482 595 - -
Gabi3995g00073 865 FunFam FERONIA receptor-like kinase 213 399 - -
Gabi3995g00073 865 Pfam Protein tyrosine and serine/threonine kinase 524 789 IPR001245 GO:0004672|GO:0006468
Gabi3995g00073 865 SMART serkin_6 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3995g00073 865 Gene3D Transferase(Phosphotransferase) domain 1 596 817 - -
Gabi3995g00073 865 SUPERFAMILY Protein kinase-like (PK-like) 500 795 IPR011009 -
Gabi3995g00073 865 FunFam receptor-like protein kinase FERONIA 483 595 - -
Gabi3995g00073 865 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Gabi3995g00073 865 FunFam Receptor-like protein kinase FERONIA 596 809 - -
Gabi3995g00073 865 Gene3D - 213 399 - -
Gabi3995g00073 865 Gene3D - 32 192 - -
Gabi3995g00073 865 PANTHER OS07G0166700 PROTEIN 505 799 IPR045272 GO:0004714|GO:0006468
Gabi3995g00073 865 Pfam Malectin-like domain 34 397 IPR024788 -
Gabi3995g00073 865 FunFam FERONIA receptor-like kinase 31 192 - -
Gabi3995g00073 865 CDD STKc_IRAK 526 793 - -
Gabi3995g00073 865 ProSiteProfiles Protein kinase domain profile. 520 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00073 Gabi-Chr3995 405894 408720 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00073 21 865 Receptor kinase-like Gene Family AT3G51550 53.401 0.0 854
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gabi3995g00073 Malectin_like 2.6e-38 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00073 - - gmx:102659961 1419.45