Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00055 ATGGAAAGAGTGTTGTCAGTGGATGAAATATCGGAACAGTACTTTTGGTCGGATGAATCGTGCAAGTCAAATTCAAAGATGAATCGGAGCGATTCCGAATGGGCATTCCAGCGTTTCTTACAAGAAGCTTCTTCTGCATCGTCCACCGTTGATGTCAAACTCGCGAAAAACAACTTCCCCGTTTCTGTTGATTCCGATGACTACCAGGCTATACTCAAGACCAAGCTCAATCTCGCTTGCGCCGCCGTCGCTTTGACTCGGGGGTCTATGGTCAAATCTCAAAATCCTGCCACTTTTCCTGATTGTGGGTCACAGGCATCTAATCCTTCTGAAGTTGGATCTCAGGGTACTTTGAAAGGATCTGGCCCTTCTGGAAATGATCCATATAAATCACAAAATAAAGGTGTCAAAGTACCAGTTGGGGTTCCTTGCTTGCTTTCCATGCAAAACAAACCTGTTGTTTCAATCAGGTCAATAACAAGTGGATCATCAAAAGAACAGTCAGATGATGAGGAAGCTGAGGGAGAGATTAATATGATTGAAAACATGGACCCTTCTGATGCAAAACGAGTAAGGAGGATGCTTTCTAATAGGGAGTCTGCCAGACGCTCAAGAAGAAGAAAGCAGGCTCATTTAACTGAGCTTGAGACACAGGTCTCTCAATTAAGAGATGAAAATTCCTCATTGTTAAAGCGCTTAACGGATGTGAGGCAGAAATACAGTGATGCTGCTGTTGACAACAGAGTATTAAAAGCTGATGTCGAAACATTAAGAGCTAAGGTGAAGATGGCTGAAGAGACCGTCAAAAGAATTACTGGGTTGAACCCAACGTTTCAAGCTGTTTCTGGGATATCATCAATGGGAATGTCATTATTTGATGGAAGGCCTTCTGAGACATTAACTGATGCGGCTGTTCCTGTGAAAGAAGACCCAAATCATAACTTTTGTCAACCCACTTCTAACAATCTTGTGTCCAGTCATGATCTGAGAGTCAACAAAGGGGTGGGAAGCATTTCTTCGATTGAAAGTGTGCAGCAGAACACTGCACCAGTGGTAGGTGGTAAGAAGATGGGGCGAACAACTTCCCTGCAGCGGGTGACTAGCTTGGAACATCTTCAAAAGCGGATTCGTGGCGGTGTCGATTCATCTGGACCTCTTTCTAATGGAAAGCAGTGA 1176 0.4405 MERVLSVDEISEQYFWSDESCKSNSKMNRSDSEWAFQRFLQEASSASSTVDVKLAKNNFPVSVDSDDYQAILKTKLNLACAAVALTRGSMVKSQNPATFPDCGSQASNPSEVGSQGTLKGSGPSGNDPYKSQNKGVKVPVGVPCLLSMQNKPVVSIRSITSGSSKEQSDDEEAEGEINMIENMDPSDAKRVRRMLSNRESARRSRRRKQAHLTELETQVSQLRDENSSLLKRLTDVRQKYSDAAVDNRVLKADVETLRAKVKMAEETVKRITGLNPTFQAVSGISSMGMSLFDGRPSETLTDAAVPVKEDPNHNFCQPTSNNLVSSHDLRVNKGVGSISSIESVQQNTAPVVGGKKMGRTTSLQRVTSLEHLQKRIRGGVDSSGPLSNGKQ 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00055 391 Gene3D - 188 243 - -
Gabi3995g00055 391 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 192 207 IPR004827 GO:0003700|GO:0006355
Gabi3995g00055 391 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 187 239 IPR004827 GO:0003700|GO:0006355
Gabi3995g00055 391 MobiDBLite consensus disorder prediction 92 135 - -
Gabi3995g00055 391 Pfam bZIP transcription factor 188 241 IPR004827 GO:0003700|GO:0006355
Gabi3995g00055 391 SMART brlzneu 185 249 IPR004827 GO:0003700|GO:0006355
Gabi3995g00055 391 CDD bZIP_plant_GBF1 190 241 IPR045314 GO:0003700|GO:0006355
Gabi3995g00055 391 Coils Coil 247 267 - -
Gabi3995g00055 391 FunFam BZIP transcription factor 187 238 - -
Gabi3995g00055 391 SUPERFAMILY Leucine zipper domain 189 240 IPR046347 GO:0003700|GO:0006355
Gabi3995g00055 391 Coils Coil 198 239 - -
Gabi3995g00055 391 MobiDBLite consensus disorder prediction 92 131 - -
Gabi3995g00055 391 Pfam Basic leucine-zipper C terminal 256 380 IPR020983 -
Gabi3995g00055 391 PANTHER BASIC LEUCINE ZIPPER 63 1 380 - -
Gabi3995g00055 391 MobiDBLite consensus disorder prediction 157 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00055 Gabi-Chr3995 308284 312966 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00055 1 278 bZIP Transcription Factor Family AT4G02640 37.994 6.34e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3995g00055 bZIP_C 2.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00055 K25784 - gmx:778137 489.189