Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00044 ATGTCCACCTCCAGGGTAACCCTGCACTCAAAACTAACTGCTGTGTCCAGCAAACCCGGGTCGGGTAAGACCCATACCCTATCCGCGTTGGACCATGCCATGGGTTTCCACACTGTCCACATCATATTCTACTACAAGAACGACGACAACTTGTTTGGATCGTTTGATATTGATCCGTTGAGGGAGTCATTGTCCGAGGTTCTTACTATGTACCCGACAATGACGGGTCGGTTGGCCCGAGGAATGGATGGTAACTGGCAAGTTCGGTGCAGTGATGCGGGTGTTCGGGTCTTAAAGGCCAAAGTGGATACCACACTCGATGAATGGCTCTCATCTGGATCCCAAGAGTCACATTTAATTGCTTGGGATGATATGCCAGATGATCCTAGCCAATGGTCCCCCTTTCGAATTCAGATAAACAGCTTCCGAGAAGGAGGTGTTGCAATAGGACTAAGTTGTAGTCACATGCTTGCTGATCTAACTTGCGCAGCATCATTCCTTAAATCATGGACTGAAGCACACCGACGCTTGCCCATTACCAACCCTCCTTTCTTCAGTTCACTTCGAAACGCAGATGCTACGTCTCTCACTCGCTATGCAACAATTCCATCCACAAAGACACAAACATCTCCTTCAAGAAACATGGCCACGGCCACTTTCAAGTTTTCAAGTTCAAGCATCGAGCTGTGTCTCTCAAAAGTCCATGATGAATGCCCCAATGCTACCCCATTTGATTTCCTTTCGGCTCTGTTTTGGACTCGTATTGCTCGCTTGAAGCTTCCAAAAAACCATGACCAAACTCATTCTCTATCGATCTGCACCGACTTTAGGAGGCTCCTGAAAGAACCCCTCCCAATTGGGTATTTCGGAAATGCTGTGCATTTTTCAAAGCTTTCACTGAAAGTGAAAGACACTGACAGTGAACGATTAGGAAGCATAGCTAGTCAAGTGCATAGGCACTTGGAAGGGGTTGCAGAGGAAGAAATCTGGTGTGCCATAGAATGGTTTGAGTCGCAAAAGGAATCAGAGGGAGGGAAGTTCAAATCACCTACTTGCATGTATGGGCCTGAGTTAACTTGTGTTTGCATGGAGCACATGATAATTTCGTCAGAAGAAGCAGATCAACCGTTGCTATATGCTGCAATGTTTAGCAAAAATGAGAAGCCAGCTCATGTTTCATGTCACGTGGGGAATATGAATGGTGAAGGTTTAATCATGGTGATGCCTTCCTTAGAAGGAGGGCTTGCAAGAACGGTGATGGTGATGCTGCCAGAGGAAGAACTCCCTCAACTATGCAACGATCAAGTTATATCGCAGCTGGAGCCTACAATGCTTCTTACTGGTTGTGTGTTAGACCATTGA 1362 0.4648 MSTSRVTLHSKLTAVSSKPGSGKTHTLSALDHAMGFHTVHIIFYYKNDDNLFGSFDIDPLRESLSEVLTMYPTMTGRLARGMDGNWQVRCSDAGVRVLKAKVDTTLDEWLSSGSQESHLIAWDDMPDDPSQWSPFRIQINSFREGGVAIGLSCSHMLADLTCAASFLKSWTEAHRRLPITNPPFFSSLRNADATSLTRYATIPSTKTQTSPSRNMATATFKFSSSSIELCLSKVHDECPNATPFDFLSALFWTRIARLKLPKNHDQTHSLSICTDFRRLLKEPLPIGYFGNAVHFSKLSLKVKDTDSERLGSIASQVHRHLEGVAEEEIWCAIEWFESQKESEGGKFKSPTCMYGPELTCVCMEHMIISSEEADQPLLYAAMFSKNEKPAHVSCHVGNMNGEGLIMVMPSLEGGLARTVMVMLPEEELPQLCNDQVISQLEPTMLLTGCVLDH 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00044 453 Gene3D - 1 196 IPR023213 -
Gabi3995g00044 453 Gene3D - 197 433 IPR023213 -
Gabi3995g00044 453 SUPERFAMILY CoA-dependent acyltransferases 26 189 - -
Gabi3995g00044 453 MobiDBLite consensus disorder prediction 1 22 - -
Gabi3995g00044 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 425 - -
Gabi3995g00044 453 Pfam Transferase family 5 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00044 Gabi-Chr3995 241647 243857 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00044 36 341 Monolignol Biosynthesis Gene Families AT5G48930 27.640 2.43e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00044 - - lja:Lj1g3v4958860.1 640.958