Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00041 ATGGGAAAGGCAGGGAAATGGATTAGAAACTTTCTTCTAGGGAGAAAGGAAGAGAAATTCAAGAAGATTGATACATTCTGCCCCGAGAATATGAGTGGTCAAATGGTGAGTCCCAAAGTGAAGCGCAGATGGAGCTTCGGAAAACTAACAGGTGGAAGAATAACAAGCAAGGTAACTCGGCATAAATTTTCCAGATCTTTTGACTCAGATGAATCTGCAAAACTGCAAATAAAAGCCTTGTTGAAAACTCAGACTCCAAAGTGTCTTCCAACAGCACTGACAAAGGTTTCTGAAGACACTGAATTTGAAAACACAGCTGCTACAAAGATTCAGGCTGCCTTTCGCTCATATTTGGCCAAGAAAGCATTGCATGCTTTGAGAGGATTAGTCAAGATACAGGCGCTAGTGAGGGGTCACCTTGTAAGGAAACAAGCAACTGCTACCCTGCGTGGCATGCATGCGTTGATGGCCATACAAGTTAGAGCTCGAATTCACAGAATTCAGATGGTAGAGGAAGCAAATCTCCTCCGAAATCAGCCTCCCCAACGCGGAGAAGTTCTACGCTTCAAAGGTCTCATAACAGAAAATAAAGATTCAAAGGATATGAGTCTGGAAGAAATGTTGGAGGTATTGAAAAGTAGAAGTGGCCCTCTAGATGGTTCATATGTTAAGAGCAGAGAGCATGATTCCATGACATTATATTCAAAACGTCCATCAGTTTCAAAACGAGAAAATCAATACGAGAATGCTTTAATCACAGCACCAAATAGCTCAGGAAATTACGGGGCCATGTATGAATTCAACCAAACAGCAGTGGCCTTATCAGATTCTCAGCGCCACCCAGTGCCTCACCGTCAATCATGGTCGCCAAATTATATGAACAAGACTGAATCTTCAAGGGCAAAATCAAGGTCTCAGAGTGAACCAAGACAACGAACGAGGCACAAAAACAAGTCTGTAGGATCTCCGTTGAATGCTCCAAGGAAAAATCTGTTCTCAAACTCGTTACGCTTCGATCCTGGAAGCCTGGACCATTGGGTTACTAACCTTCATGGGTCAACGAAGGACAGCAAACGCGATTCCTTTGGAAGCAGCACGGTTACTAGCGATTCCTACTACTGA 1122 0.434 MGKAGKWIRNFLLGRKEEKFKKIDTFCPENMSGQMVSPKVKRRWSFGKLTGGRITSKVTRHKFSRSFDSDESAKLQIKALLKTQTPKCLPTALTKVSEDTEFENTAATKIQAAFRSYLAKKALHALRGLVKIQALVRGHLVRKQATATLRGMHALMAIQVRARIHRIQMVEEANLLRNQPPQRGEVLRFKGLITENKDSKDMSLEEMLEVLKSRSGPLDGSYVKSREHDSMTLYSKRPSVSKRENQYENALITAPNSSGNYGAMYEFNQTAVALSDSQRHPVPHRQSWSPNYMNKTESSRAKSRSQSEPRQRTRHKNKSVGSPLNAPRKNLFSNSLRFDPGSLDHWVTNLHGSTKDSKRDSFGSSTVTSDSYY 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00041 373 ProSiteProfiles IQ motif profile. 103 131 IPR000048 GO:0005515
Gabi3995g00041 373 MobiDBLite consensus disorder prediction 301 315 - -
Gabi3995g00041 373 Pfam IQ calmodulin-binding motif 106 123 IPR000048 GO:0005515
Gabi3995g00041 373 Pfam IQ calmodulin-binding motif 130 144 IPR000048 GO:0005515
Gabi3995g00041 373 MobiDBLite consensus disorder prediction 275 373 - -
Gabi3995g00041 373 Gene3D - 103 154 - -
Gabi3995g00041 373 MobiDBLite consensus disorder prediction 359 373 - -
Gabi3995g00041 373 Pfam Protein of unknown function (DUF4005) 275 320 IPR025064 -
Gabi3995g00041 373 PANTHER IQ-DOMAIN 5-RELATED 1 331 - -
Gabi3995g00041 373 MobiDBLite consensus disorder prediction 318 337 - -
Gabi3995g00041 373 SMART iq_5 102 124 IPR000048 GO:0005515
Gabi3995g00041 373 SMART iq_5 125 146 IPR000048 GO:0005515
Gabi3995g00041 373 MobiDBLite consensus disorder prediction 275 300 - -
Gabi3995g00041 373 ProSiteProfiles IQ motif profile. 127 154 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00041 Gabi-Chr3995 222168 223773 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00041 1 338 IQD Protein Family AT4G14750 34.000 5.26e-34 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00041 - - gmx:100527816 521.161