Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00017 ATGAATGGTGTGACACAGGTTGAACCAGATTCCTCTGAGTTTGTTGAAGTTGATCCAACTGGTAGATATGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAAAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAACTAAATGATTTCCTGCAAAGCCCTGAAGATCTCGAGAGGCTTTACTGCGAAATTCATCTCCTGAAGACATTGAAGCACAGAAACATTATGAAATTTTACACGTCTTGGGTCGATACTGCAAATAGGAATATCAATTTCGTTACTGAATTGTTCTCTTCTGGTACTCTTAGACAGTATAGGCTAAAGCACAAGAAAGTGAACATCAGAGCCGTGAAGCATTGGTGTAGACAGATCCTGAGAGGACTTCTCTATCTTCATAGCCATGACCCGGTTGTGATCCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGAAACCAAGGTGAAGTGAAGATTGGGGATCTTGGCCTGGCAGCAATTCTCCGGAAATCTCATGCTGCTCATTGTGTAGGAACACCCGAGTTCATGGCACCAGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATCTATTCCTTTGGGATGTGCATATTAGAAATGGTCACATTTGAATATCCTTATAGCGAATGCAACCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAAAAACCAGATGCTTTGTATAAAGTGAAGGATCCAGAAGTGCGCCAATTTGTTGAGAAATGCCTGGCAACAGTGTCTTTAAGGCTCTCTGCAAGGCAGCTTCTAGATGATCCTTTTCTTCGGAATGAAGACTACGAATATGATCTGGGACCAGTAGACGGCAGAGCATTTGATGGCTTGGGTCCTCTCATCACGGAGGTTGAACCTAATGGAATTGAACTTTTCGAGTGCCATGACGATGAACCCTCGGCAGATGTTGACATAAGCATCAAAGGCAAGAGGGATGATGAAAGTGGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGCCGAATTCGAAATATTTATTTCCCATTTGATCTAGAGATGGACACAGCAATAAGTGTAGCAAGTGAAATGATTGCGGAACTCGACATTACCGATCAGGATGTTACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTAGTACCTGAATGGAGGCCAGGACCAGGAATTGAGGAAACTACCCATTTTACAAATCAAAGTTTGTGTCACAATTGTGTGTCTAATCATACTTCTGGTGGCAATGTTATGGATTTTCTTTCACATAATCAGGGTGGGAAGAACTTGCAGCTTCTTCAGTGCTCTAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAGGAGTATGACAATCATGTTAGAGAGGATGCACCTAACGTATCAAGCCAACCAGACTGCTTGCAGTATCAGGAGTTATGGAATCATCAGGAAAGTCGTGAACTGAGTCCAGTGGAGTCTGATCAAAGCCATTCTGATGAACAATATGAACAACTAGACAGATCAGTATTAGCAGAAGACAAAGGACACGATGTTTGGGAAAACAAGTTTGCATCCGATGCAAACTCCTCACGAAATTCATCAGGAACTCACTATTTCTCTACAATCAGTTCGTTATGTTGTGGCCTTGAGAATGAATATGAGAGGGAGATCCAACAAGAAATGAGAAGGCTCAGAGCAACATACCAAATGGGGTTAAGGGAACTCAAGGATCAACTTATTGGTCTAACGGCTAAATCTTCACACACTTGTTACGGAGAGCTCAAAACAGATCAAGGCATTGTGACACCACCTTCACTAACAGCAACTGTAAACGGAGACGACCATGGGATATACTTGAAACCCTTTGATAATCTCTGGAATGGTGATTCCAGTTGCCATTCTCAAGTCCAAAAGATCCACCCCAATTTGGACACCCAAAGGGCCCAAAATTGTGAGGTGATGTGTTCTCCTCGAGACAGTATGGTTACTGCAAAGAATTTTTACACAGAATCGTTGCTTCCAGACACACTACACAGGACAGTTTCCCTCCCTGTTGATGCTGTGGATTTATAA 2130 0.4197 MNGVTQVEPDSSEFVEVDPTGRYGRYNEILGKGASKTVYKAFDEYQGIEVAWNQVKLNDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTELFSSGTLRQYRLKHKKVNIRAVKHWCRQILRGLLYLHSHDPVVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARQLLDDPFLRNEDYEYDLGPVDGRAFDGLGPLITEVEPNGIELFECHDDEPSADVDISIKGKRDDESGIFLRLRIADKEGRIRNIYFPFDLEMDTAISVASEMIAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIEETTHFTNQSLCHNCVSNHTSGGNVMDFLSHNQGGKNLQLLQCSRHGCASMHGRFEEITFQSEEYDNHVREDAPNVSSQPDCLQYQELWNHQESRELSPVESDQSHSDEQYEQLDRSVLAEDKGHDVWENKFASDANSSRNSSGTHYFSTISSLCCGLENEYEREIQQEMRRLRATYQMGLRELKDQLIGLTAKSSHTCYGELKTDQGIVTPPSLTATVNGDDHGIYLKPFDNLWNGDSSCHSQVQKIHPNLDTQRAQNCEVMCSPRDSMVTAKNFYTESLLPDTLHRTVSLPVDAVDL 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00017 709 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Gabi3995g00017 709 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Gabi3995g00017 709 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Gabi3995g00017 709 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gabi3995g00017 709 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 603 - -
Gabi3995g00017 709 Gene3D - 323 405 - -
Gabi3995g00017 709 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 342 396 IPR024678 GO:0004674|GO:0005524
Gabi3995g00017 709 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3995g00017 709 CDD STKc_WNK 22 281 - -
Gabi3995g00017 709 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Gabi3995g00017 709 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3995g00017 709 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Gabi3995g00017 709 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00017 Gabi-Chr3995 117492 120845 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00017 1 477 MAP Kinase Kinase Kinase AT3G22420 57.250 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3995g00017 Pkinase 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00017 K08867 - gmx:100775959 1124.77