Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3995g00015 | ATGAATGGTGTGACACAGGTTGAACCAGATTCCTCTGAGTTTGTTGAAGTTGATCCAACTGGTAGATATGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAAAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAACTAAATGATTTCCTGCAAAGCCCTGAAGATCTCGAGAGGCTTTACTGCGAAATTCATCTCCTGAAGACATTGAAGCACAGAAACATTATGAAATTTTACACGTCTTGGGTCGATACTGCAAATAGGAATATCAATTTCGTTACTGAATTGTTCTCTTCTGGTACTCTTAGACAGTATAGGCTAAAGCACAAGAAAGTGAACATCAGAGCCGTGAAGCATTGGTGTAGACAGATCCTGAGAGGACTTCTCTATCTTCATAGCCATGACCCGGTTGTGATCCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGAAACCAAGGTGAAGTGAAGATTGGGGATCTTGGCCTGGCAGCAATTCTCCGGAAATCTCATGCTGCTCATTGTGTAGGAACACCCGAGTTCATGGCACCAGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATCTATTCCTTTGGGATGTGCATATTAGAAATGGTCACATTTGAATATCCTTATAGCGAATGCAACCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAAAAACCAGATGCTTTGTATAAAGTGAAGGATCCAGAAGTGCGCCAATTTGTTGAGAAATGCCTGGCAACAGTGTCTTTAAGGCTCTCTGCAAGGCAGCTTCTAGATGATCCTTTTCTTCGGAATGAAGACTACGAATATGATCTGGGACCAGTTGAACCTAATGGAATTGAACTTTTCGAGTGCCATGACGATGAACCCTCGGCAGATGTTGACATAAGCATCAAAGGCAAGAGGGATGATGAAAGTGGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGCCGAATTCGAAATATTTATTTCCCATTTGATCTAGAGATGGACACAGCAATAAGTGTAGCAAGTGAAATGATTGCGGAACTCGACATTACCGATCAGGATGTTACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTAGTACCTGAATGGAGGCCAGGACCAGGAATTGAGGAAACTACCCATTTTACAAATCAAAGTTTGTGTCACAATTGTGTGTCTAATCATACTTCTGGTGGCAATGTTATGGATTTTCTTTCACATAATCAGGGTGGGAAGAACTTGCAGCTTCTTCAGTGCTCTAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAGGAGTATGACAATCATGTTAGAGAGGATGCACCTAACGTATCAAGCCAACCAGACTGCTTGCAGTATCAGGAGTTATGGAATCATCAGGAAAGTCGTGAACTGAGTCCAGTGGAGTCTGATCAAAGCCATTCTGATGAACAATATGAACAACTAGACAGATCAGTATTAGCAGAAGACAAAGGACACGATGTTTGGGAAAACAAGTTTGCATCCGATGCAAACTCCTCACGAAATTCATCAGGAACTCACTATTTCTCTACAATCAGTTCGTTATGTTGTGGCCTTGAGAATGAATATGAGAGGGAGATCCAACAAGAAATGAGAAGGCTCAGAGCAACATACCAAATGGGGTTAAGGGAACTCAAGGATCAACTTATTGGTCTAACGGCTAAATCTTCACACACTTGTTACGGAGAGCTCAAAACAGATCAAGGCATTGTGACACCACCTTCACTAACAGCAACTGTAAACGGAGACGACCATGGGATATACTTGAAACCCTTTGATAATCTCTGGAATGGTGATTCCAGTTGCCATTCTCAAGTCCAAAAGATCCACCCCAATTTGGACACCCAAAGGGCCCAAAATTGTGAGGTGATGTGTTCTCCTCGAGACAGTATGGTTACTGCAAAGAATTTTTACACAGAATCGTTGCTTCCAGACACACTACACAGGACAGTTTCCCTCCCTGTTGATGCTGTGGATTTATAA | 2085 | 0.4168 | MNGVTQVEPDSSEFVEVDPTGRYGRYNEILGKGASKTVYKAFDEYQGIEVAWNQVKLNDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTELFSSGTLRQYRLKHKKVNIRAVKHWCRQILRGLLYLHSHDPVVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARQLLDDPFLRNEDYEYDLGPVEPNGIELFECHDDEPSADVDISIKGKRDDESGIFLRLRIADKEGRIRNIYFPFDLEMDTAISVASEMIAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIEETTHFTNQSLCHNCVSNHTSGGNVMDFLSHNQGGKNLQLLQCSRHGCASMHGRFEEITFQSEEYDNHVREDAPNVSSQPDCLQYQELWNHQESRELSPVESDQSHSDEQYEQLDRSVLAEDKGHDVWENKFASDANSSRNSSGTHYFSTISSLCCGLENEYEREIQQEMRRLRATYQMGLRELKDQLIGLTAKSSHTCYGELKTDQGIVTPPSLTATVNGDDHGIYLKPFDNLWNGDSSCHSQVQKIHPNLDTQRAQNCEVMCSPRDSMVTAKNFYTESLLPDTLHRTVSLPVDAVDL | 694 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3995g00015 | 694 | Pfam | Protein kinase domain | 27 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi3995g00015 | 694 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 327 | 381 | IPR024678 | GO:0004674|GO:0005524 | |
Gabi3995g00015 | 694 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 9 | 588 | - | - | |
Gabi3995g00015 | 694 | FunFam | Probable serine/threonine-protein kinase WNK1 | 9 | 105 | - | - | |
Gabi3995g00015 | 694 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 148 | 160 | IPR008271 | GO:0004672|GO:0006468 | |
Gabi3995g00015 | 694 | FunFam | probable serine/threonine-protein kinase WNK9 | 107 | 286 | - | - | |
Gabi3995g00015 | 694 | Gene3D | Transferase(Phosphotransferase) domain 1 | 107 | 288 | - | - | |
Gabi3995g00015 | 694 | CDD | STKc_WNK | 22 | 281 | - | - | |
Gabi3995g00015 | 694 | Gene3D | - | 308 | 390 | - | - | |
Gabi3995g00015 | 694 | Gene3D | Phosphorylase Kinase; domain 1 | 8 | 105 | - | - | |
Gabi3995g00015 | 694 | ProSiteProfiles | Protein kinase domain profile. | 24 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi3995g00015 | 694 | SMART | serkin_6 | 24 | 281 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Gabi3995g00015 | 694 | SUPERFAMILY | Protein kinase-like (PK-like) | 27 | 282 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3995g00015 | Gabi-Chr3995 | 117492 | 120845 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3995g00015 | 1 | 462 | MAP Kinase Kinase Kinase | AT3G22420 | 56.497 | 0.0 | 578 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | WNK_NRBP | Gabi3995g00015 | Pkinase | 7.4e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3995g00015 | K08867 | - | gmx:100775959 | 1107.82 |