Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00015 ATGAATGGTGTGACACAGGTTGAACCAGATTCCTCTGAGTTTGTTGAAGTTGATCCAACTGGTAGATATGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAAAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAGGTCAAACTAAATGATTTCCTGCAAAGCCCTGAAGATCTCGAGAGGCTTTACTGCGAAATTCATCTCCTGAAGACATTGAAGCACAGAAACATTATGAAATTTTACACGTCTTGGGTCGATACTGCAAATAGGAATATCAATTTCGTTACTGAATTGTTCTCTTCTGGTACTCTTAGACAGTATAGGCTAAAGCACAAGAAAGTGAACATCAGAGCCGTGAAGCATTGGTGTAGACAGATCCTGAGAGGACTTCTCTATCTTCATAGCCATGACCCGGTTGTGATCCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGAAACCAAGGTGAAGTGAAGATTGGGGATCTTGGCCTGGCAGCAATTCTCCGGAAATCTCATGCTGCTCATTGTGTAGGAACACCCGAGTTCATGGCACCAGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATCTATTCCTTTGGGATGTGCATATTAGAAATGGTCACATTTGAATATCCTTATAGCGAATGCAACCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAAAAACCAGATGCTTTGTATAAAGTGAAGGATCCAGAAGTGCGCCAATTTGTTGAGAAATGCCTGGCAACAGTGTCTTTAAGGCTCTCTGCAAGGCAGCTTCTAGATGATCCTTTTCTTCGGAATGAAGACTACGAATATGATCTGGGACCAGTTGAACCTAATGGAATTGAACTTTTCGAGTGCCATGACGATGAACCCTCGGCAGATGTTGACATAAGCATCAAAGGCAAGAGGGATGATGAAAGTGGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGCCGAATTCGAAATATTTATTTCCCATTTGATCTAGAGATGGACACAGCAATAAGTGTAGCAAGTGAAATGATTGCGGAACTCGACATTACCGATCAGGATGTTACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTAGTACCTGAATGGAGGCCAGGACCAGGAATTGAGGAAACTACCCATTTTACAAATCAAAGTTTGTGTCACAATTGTGTGTCTAATCATACTTCTGGTGGCAATGTTATGGATTTTCTTTCACATAATCAGGGTGGGAAGAACTTGCAGCTTCTTCAGTGCTCTAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAGGAGTATGACAATCATGTTAGAGAGGATGCACCTAACGTATCAAGCCAACCAGACTGCTTGCAGTATCAGGAGTTATGGAATCATCAGGAAAGTCGTGAACTGAGTCCAGTGGAGTCTGATCAAAGCCATTCTGATGAACAATATGAACAACTAGACAGATCAGTATTAGCAGAAGACAAAGGACACGATGTTTGGGAAAACAAGTTTGCATCCGATGCAAACTCCTCACGAAATTCATCAGGAACTCACTATTTCTCTACAATCAGTTCGTTATGTTGTGGCCTTGAGAATGAATATGAGAGGGAGATCCAACAAGAAATGAGAAGGCTCAGAGCAACATACCAAATGGGGTTAAGGGAACTCAAGGATCAACTTATTGGTCTAACGGCTAAATCTTCACACACTTGTTACGGAGAGCTCAAAACAGATCAAGGCATTGTGACACCACCTTCACTAACAGCAACTGTAAACGGAGACGACCATGGGATATACTTGAAACCCTTTGATAATCTCTGGAATGGTGATTCCAGTTGCCATTCTCAAGTCCAAAAGATCCACCCCAATTTGGACACCCAAAGGGCCCAAAATTGTGAGGTGATGTGTTCTCCTCGAGACAGTATGGTTACTGCAAAGAATTTTTACACAGAATCGTTGCTTCCAGACACACTACACAGGACAGTTTCCCTCCCTGTTGATGCTGTGGATTTATAA 2085 0.4168 MNGVTQVEPDSSEFVEVDPTGRYGRYNEILGKGASKTVYKAFDEYQGIEVAWNQVKLNDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTELFSSGTLRQYRLKHKKVNIRAVKHWCRQILRGLLYLHSHDPVVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARQLLDDPFLRNEDYEYDLGPVEPNGIELFECHDDEPSADVDISIKGKRDDESGIFLRLRIADKEGRIRNIYFPFDLEMDTAISVASEMIAELDITDQDVTRIADMIDGEIASLVPEWRPGPGIEETTHFTNQSLCHNCVSNHTSGGNVMDFLSHNQGGKNLQLLQCSRHGCASMHGRFEEITFQSEEYDNHVREDAPNVSSQPDCLQYQELWNHQESRELSPVESDQSHSDEQYEQLDRSVLAEDKGHDVWENKFASDANSSRNSSGTHYFSTISSLCCGLENEYEREIQQEMRRLRATYQMGLRELKDQLIGLTAKSSHTCYGELKTDQGIVTPPSLTATVNGDDHGIYLKPFDNLWNGDSSCHSQVQKIHPNLDTQRAQNCEVMCSPRDSMVTAKNFYTESLLPDTLHRTVSLPVDAVDL 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00015 694 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3995g00015 694 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 327 381 IPR024678 GO:0004674|GO:0005524
Gabi3995g00015 694 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 588 - -
Gabi3995g00015 694 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Gabi3995g00015 694 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Gabi3995g00015 694 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Gabi3995g00015 694 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Gabi3995g00015 694 CDD STKc_WNK 22 281 - -
Gabi3995g00015 694 Gene3D - 308 390 - -
Gabi3995g00015 694 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Gabi3995g00015 694 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3995g00015 694 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3995g00015 694 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00015 Gabi-Chr3995 117492 120845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00015 1 462 MAP Kinase Kinase Kinase AT3G22420 56.497 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3995g00015 Pkinase 7.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00015 K08867 - gmx:100775959 1107.82