Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00014 ATGAATGGTGTGACACAGGTTGAACCAGATTCCTCTGAGTTTGTTGAAGTTGATCCAACTGGTAGATATGGCAGAGTCAAACTAAATGATTTCCTGCAAAGCCCTGAAGATCTCGAGAGGCTTTACTGCGAAATTCATCTCCTGAAGACATTGAAGCACAGAAACATTATGAAATTTTACACGTCTTGGGTCGATACTGCAAATAGGAATATCAATTTCGTTACTGAATTGTTCTCTTCTGGTACTCTTAGACAGTATAGGCTAAAGCACAAGAAAGTGAACATCAGAGCCGTGAAGCATTGGTGTAGACAGATCCTGAGAGGACTTCTCTATCTTCATAGCCATGACCCGGTTGTGATCCATAGAGATCTCAAATGTGATAATATTTTTGTCAATGGAAACCAAGGTGAAGTGAAGATTGGGGATCTTGGCCTGGCAGCAATTCTCCGGAAATCTCATGCTGCTCATTGTGTAGGAACACCCGAGTTCATGGCACCAGAAGTATATGAAGAGGCATATAATGAATTAGTTGACATCTATTCCTTTGGGATGTGCATATTAGAAATGGTCACATTTGAATATCCTTATAGCGAATGCAACCATCCAGCACAAATCTACAAGAAAGTTATTTCTGGGAAAAAACCAGATGCTTTGTATAAAGTGAAGGATCCAGAAGTGCGCCAATTTGTTGAGAAATGCCTGGCAACAGTGTCTTTAAGGCTCTCTGCAAGGCAGCTTCTAGATGATCCTTTTCTTCGGAATGAAGACTACGAATATGATCTGGGACCAGTAGACGGCAGAGCATTTGATGGCTTGGGTCCTCTCATCAGTCAGCCATTCTTGGATCTCCATCGGAGCTATAGTAACTTAAGTACTGAATGCTCAAATGGCTTTGGATATGGGGACTGGTATTCTCATCTAGCGGAGGTTGAACCTAATGGAATTGAACTTTTCGAGTGCCATGACGATGAACCCTCGGCAGATGTTGACATAAGCATCAAAGGCAAGAGGGATGATGAAAGTGGCATCTTTTTGAGACTAAGAATTGCAGATAAAGAAGGCCGAATTCGAAATATTTATTTCCCATTTGATCTAGAGATGGACACAGCAATAAGTGTAGCAAGTGAAATGATTGCGGAACTCGACATTACCGATCAGGATGTTACCAGAATAGCAGATATGATAGATGGGGAAATTGCTTCCTTAGTACCTGAATGGAGTTTGTGTCACAATTGTGTGTCTAATCATACTTCTGGTGGCAATGTTATGGATTTTCTTTCACATAATCAGGGTGGGAAGAACTTGCAGCTTCTTCAGTGCTCTAGGCATGGATGTGCTTCAATGCATGGGCGGTTTGAGGAGATTACCTTCCAATCTGAGGAGTATGACAATCATGTTAGAGAGGATGCACCTAACGTATCAAGCCAACCAGACTGCTTGCAGTATCAGGAGTTATGGAATCATCAGGAAAGTCGTGAACTGAGTCCAGTGGAGTCTGATCAAAGCCATTCTGATGAACAATATGAACAACTAGACAGATCAGTATTAGCAGAAGACAAAGGACACGATGTTTGGGAAAACAAGTTTGCATCCGATGCAAACTCCTCACGAAATTCATCAGGAACTCACTATTTCTCTACAATCAGTTCGTTATGTTGTGGCCTTGAGAATGAATATGAGAGGGAGATCCAACAAGAAATGAGAAGGCTCAGAGCAACATACCAAATGGGGTTAAGGGAACTCAAGGATCAACTTATTGGTCTAACGGCTAAATCTTCACACACTTGTTACGGAGAGCTCAAAACAGATCAAGGCATTGTGACACCACCTTCACTAACAGCAACTGTAAACGGAGACGACCATGGGATATACTTGAAACCCTTTGATAATCTCTGGAATGGTGATTCCAGTTGCCATTCTCAAGTCCAAAAGATCCACCCCAATTTGGACACCCAAAGGGCCCAAAATTGTGAGGTGATGTGTTCTCCTCGAGACAGTATGGTTACTGCAAAGAATTTTTACACAGAATCGTTGCTTCCAGACACACTACACAGGACAGTTTCCCTCCCTGTTGATGCTGTGGATTTATAA 2091 0.4209 MNGVTQVEPDSSEFVEVDPTGRYGRVKLNDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTELFSSGTLRQYRLKHKKVNIRAVKHWCRQILRGLLYLHSHDPVVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEEAYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVISGKKPDALYKVKDPEVRQFVEKCLATVSLRLSARQLLDDPFLRNEDYEYDLGPVDGRAFDGLGPLISQPFLDLHRSYSNLSTECSNGFGYGDWYSHLAEVEPNGIELFECHDDEPSADVDISIKGKRDDESGIFLRLRIADKEGRIRNIYFPFDLEMDTAISVASEMIAELDITDQDVTRIADMIDGEIASLVPEWSLCHNCVSNHTSGGNVMDFLSHNQGGKNLQLLQCSRHGCASMHGRFEEITFQSEEYDNHVREDAPNVSSQPDCLQYQELWNHQESRELSPVESDQSHSDEQYEQLDRSVLAEDKGHDVWENKFASDANSSRNSSGTHYFSTISSLCCGLENEYEREIQQEMRRLRATYQMGLRELKDQLIGLTAKSSHTCYGELKTDQGIVTPPSLTATVNGDDHGIYLKPFDNLWNGDSSCHSQVQKIHPNLDTQRAQNCEVMCSPRDSMVTAKNFYTESLLPDTLHRTVSLPVDAVDL 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00014 696 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 25 590 - -
Gabi3995g00014 696 CDD STKc_WNK 10 252 - -
Gabi3995g00014 696 Gene3D - 324 406 - -
Gabi3995g00014 696 Gene3D Phosphorylase Kinase; domain 1 26 76 - -
Gabi3995g00014 696 Gene3D Transferase(Phosphotransferase) domain 1 78 259 - -
Gabi3995g00014 696 FunFam probable serine/threonine-protein kinase WNK9 78 257 - -
Gabi3995g00014 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Gabi3995g00014 696 SUPERFAMILY Protein kinase-like (PK-like) 30 253 IPR011009 -
Gabi3995g00014 696 SMART serkin_6 12 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3995g00014 696 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 344 398 IPR024678 GO:0004674|GO:0005524
Gabi3995g00014 696 Pfam Protein kinase domain 36 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3995g00014 696 ProSiteProfiles Protein kinase domain profile. 1 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00014 Gabi-Chr3995 117492 120845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00014 1 458 MAP Kinase Kinase Kinase AT5G28080 64.119 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gabi3995g00014 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00014 K08867 - gmx:100775959 1077.77