Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00003 ATGGCTTCACTACCTCCCTCTCTATTGTTTACAGTGCGGAGGCGCCAACCGGAGCTGGTGACTCCAGCTATTCCTACTCCACATGAAGTTAAACTACTATCCGACATAGATGATCAAGAAGGCTTCCGTTTCCTAGCTCCATTGATACATATATATCGCAACGAACCATCCATGGCAGGGAAAGACCCTGTTGAAGTCATTAGAAAAGCACTATCACAAACACTTGTGTTCTACTACCCTTTTGCAGGTAGGCTTAAGGAAGGGCCTGGCCGCAAATTAATGGTGGATTGTACTGGAGAGGGAGTCTTGTTCGTTGAGGCTGATGCTGACGTGACACTTGATCAATTTGGTGAAGCTCCTCAACCTCCATTCCCATGCTTCCACCAACTCTTTTACGATGTTCAAAACCCAGAAGAAATCATTAACTATCCCCTTCTAGTCATACAGGTCACGCGCCTTAAGTGCGGTGGTTTTATTGTGGCCTCGCGCTTGAACCACACCATGAGCGACGGAGCTGGTATAAAACAGTTCATGAACTGCATGGGTGAAATGGCAAGGGGTGCATGCGAACCTTCCATTCAACCGGTGTGGTGTAGAGAGCTCTTAATGGCTAGAGATCCACCACGCATTACATGCAATCATCGTGAATATGAACGAGTGCCATCTAATGATACCATCAATTCATACGAGGACGACATCGTTCATCGATCTTTCTTCTTTGGACCCATCGAGATAGCTGCCATTCGTCGCTTGGTTCCCCTTCACCTTCGAAAATGCACCACATTTGATGTTATAACGGCATGGTTCTGGTGCTGCCGTACAAAAGCATTGCAACTAAAGCAAGAGGTGGAGGTTCGGTTGATGTGCATGGCCAATGCACGTGCTAGGTTTAACCCTCCATTACCTGATGGTTATTATGGCAACGCTATTGCATACCCGACGGCGGTCACAACTGCAGGGAAGCTTAGCTTTGGGTATGCACTGGAATTAATAAAGAAAGTAAAAGCTGAGGTAACAGAAGAATATGTGCATTCTGTGGCAGATCTAATGGTGACTAAGGGTCGATGCTTATTTACGACTGTAAACTCATGTATAGTGTCAGATTTGACACGTGCTCGGTTTAGAGAAGTTGATTTTGGATGGGGTAAGGCAGTGTATGGTGGACTGGCCAAAGGTGGGGCTGGGGCCTTTCCTGGAGTAACTTTTCTCGTTCCTCACAAGAACGCAAGAGGAGAAGAAGGTATAATATTGCCAATTTGCTTGCCAGCAAAAGCTATGAAAAGCTTTGCTAAAGAGTTTGAGGACATGCTTGGGGACCAAAACCGATCTACAATGAGTGATCTTAGAATCATGTCTAGCTTATAG 1365 0.4586 MASLPPSLLFTVRRRQPELVTPAIPTPHEVKLLSDIDDQEGFRFLAPLIHIYRNEPSMAGKDPVEVIRKALSQTLVFYYPFAGRLKEGPGRKLMVDCTGEGVLFVEADADVTLDQFGEAPQPPFPCFHQLFYDVQNPEEIINYPLLVIQVTRLKCGGFIVASRLNHTMSDGAGIKQFMNCMGEMARGACEPSIQPVWCRELLMARDPPRITCNHREYERVPSNDTINSYEDDIVHRSFFFGPIEIAAIRRLVPLHLRKCTTFDVITAWFWCCRTKALQLKQEVEVRLMCMANARARFNPPLPDGYYGNAIAYPTAVTTAGKLSFGYALELIKKVKAEVTEEYVHSVADLMVTKGRCLFTTVNSCIVSDLTRARFREVDFGWGKAVYGGLAKGGAGAFPGVTFLVPHKNARGEEGIILPICLPAKAMKSFAKEFEDMLGDQNRSTMSDLRIMSSL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00003 454 PANTHER ACYL TRANSFERASE 4 10 436 - -
Gabi3995g00003 454 Pfam Transferase family 12 436 - -
Gabi3995g00003 454 Gene3D - 216 434 IPR023213 -
Gabi3995g00003 454 Gene3D - 8 215 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00003 Gabi-Chr3995 39767 41430 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00003 12 431 Monolignol Biosynthesis Gene Families AT5G48930 30.435 3.16e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00003 K19861 - gmx:100792864 653.284