Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3995g00001 ATGGCTTCACTACCTCCCTCTCTATTGTTTACAGTGAGGAGGCGCCAACCGGAGCTGGTAGCTCCAGCTATACTCACTCCACATGAAGTTAAATTACTATCCGACATAGATGATCAACAAGGCCTCCGTTTCCTAGCTCCAGTCATACACATATATCGTTACGAACCATCAATGGGAGGGAAAGACCCAGTTGAAGTCATTAGAAAGGCACTATCACAAACACTTGTTTTCTACTACCCATATGCAGGTAGGCTTAGGGAAGGGCCTGGCCGCAAATTGATGGTGGATTGTACTGGAGAAGGTGTCTTGTTCGTTGAGGCTGATGCTGACGTAACACTTGATCAATTTGGTGACTCTCTTCAACCTCCATTCCCATGCTTCCACCAACTCTTTTATGATGTTCCAGCCTCTGAAGAAATCATTAACTATCCCCTTCTCGTCATACAGATCACGCGCATTAAGTGCGGTGGTTTCATCGTGGCCTCGCGCTTTAACCACACCATGAGCGATGCGGCTGGTATAAAACAATTCATGAACTGCATGGGTGAAATGGCAAGAGGTGCACGTGAACCTTCCATTCAACCGGTGTGGTGTAGGGAACTCTTAATGGCTAGAGATCCACCGCGCATTACATGCAATCATCGTGAATACGAACAAGTGCCATATGATGATACCATCAATTCATACGAGGATGACATCGTTCATCGATCTTTCTACTTTGGACCCACCGAGATAGTTGCCCTTCGTCGCTTGGTTCCACTTCACCTTCCTTATTACACCACATTTGATGTTATCACGGCATGCTTCTGGGTCTGCCGTACAAAAGCATTGCAGCTAAAGCCAGAGGAAGAGGTTCGATTGATGTGCATGGTCAACGCACGTGCTAGGTTTAACCCTCCGTTACCTGATGGATATTACGGCAACGCTATTGCATACCCGGCAGCAGTGACCACTGCAGGGAAACTTAGCTTTGGGTATGCACTAGAATTAATAAAGAAAGTGAAAGCTGAGGTGACAGAAGAGTATATGCATTCACTGGCAGATCTAATGGTGACTAAGGGACGATGCTTATTTACGACCGTAAGATCATGTCTCGTGTCAGATCTGACACGTGCTCAGTCTAGAGAAGTTGATTTTGGATGGGGCAAGGCAGTGTATGGTGGAATGGCCAAAGGTGGGGCTGGGGCCTTTACTGGAGTAACTTATCTCGTTCCCCACAAGAACGCAAGAGGAGAAGAAGGTATAATATTGCCAATTTGCTTGTCCGCGATAGTCATGAAAAGCTTTGCTAAAGAGTTTGAAGACATACTTGGGAACCAAGACCTATCTACAAGGAGTGATCTTAGGATCATGTCTAGCTTATAG 1365 0.4608 MASLPPSLLFTVRRRQPELVAPAILTPHEVKLLSDIDDQQGLRFLAPVIHIYRYEPSMGGKDPVEVIRKALSQTLVFYYPYAGRLREGPGRKLMVDCTGEGVLFVEADADVTLDQFGDSLQPPFPCFHQLFYDVPASEEIINYPLLVIQITRIKCGGFIVASRFNHTMSDAAGIKQFMNCMGEMARGAREPSIQPVWCRELLMARDPPRITCNHREYEQVPYDDTINSYEDDIVHRSFYFGPTEIVALRRLVPLHLPYYTTFDVITACFWVCRTKALQLKPEEEVRLMCMVNARARFNPPLPDGYYGNAIAYPAAVTTAGKLSFGYALELIKKVKAEVTEEYMHSLADLMVTKGRCLFTTVRSCLVSDLTRAQSREVDFGWGKAVYGGMAKGGAGAFTGVTYLVPHKNARGEEGIILPICLSAIVMKSFAKEFEDILGNQDLSTRSDLRIMSSL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3995g00001 454 Gene3D - 11 216 IPR023213 -
Gabi3995g00001 454 Gene3D - 217 435 IPR023213 -
Gabi3995g00001 454 Pfam Transferase family 12 435 - -
Gabi3995g00001 454 PANTHER ACYL TRANSFERASE 4 10 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3995g00001 Gabi-Chr3995 8143 9760 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3995g00001 12 431 Monolignol Biosynthesis Gene Families AT5G48930 30.365 1.20e-48 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3995g00001 K19861 - gmx:100792864 638.262