Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3991g00046 ATGGCCAATTCATTTGTCTTCGATGTTGCTGAATCCCTGTTGAACAAGCTTGCTTCTCATGTTTATGAAGAAGCTTCTCGAGCCTATGGTGTGTATGACGATCTCAAAGGGTTCAAAGATACTTTGTTAATTGTAAAAGCTGTATTATTGGATGCTGAGGAGAAGAAGGAACTAAGCCATGCCTTGCGTGAGTGGCTGAGGCAGATTCATCATGTCTGCTCCGATGCTGAAGATGTTTTGGATGGATTTGACTGCCAAACCTTGCGCAAGAAAGTGATCGAAGCTTCTGGCAGCACCAGGATGAAGGTAGGCCACTTCTTTTCTAAGTCTAATCCTCTTGTTTTCCGTATTAGGATGGCTCATCAAATCAAACAACTTAAGGATAGATTGGATAAGGTAGCTGCTGATGGGAATAAGTTTGGTCTTGTTCATGAGAGGATTGATGTTGACCACAGACTTGTGGTGCAAAGGAGAGAAATGACTTATTCCCATGTTGATGCTTCAAATGTGATAGGAAGGGAGAATGATAGGGAAAATATTATCCAACTTTTGATGCAACCCCACTCTGATGGTGTTAAAAGTCTCTGTGTTATTCCCATAGTGGGCATTGGAGGTTTGGGGAAGACCACACTTGCTAAGTTGGTGTTCAATGATAAGAGGATAGATGAGTTTTTCCCTTTGAAGATGTGGGTATGTGTCTCTAATGATTTTGACATCAGGCAGATAATTATTAAAATCATTAATTCTGCTTCAGATTCTGCTGCAAGTACTGCTCTTGCTCACCATGAAAACATTAGTAACTTAGATATTGAGCAGCTACAAGGTCGTCTTAGACATAAGCTTTCTGGTCAAAAGTTCCTACTTGTCTTGGATGATATATGGAATGAAGATCGTGCAAAATGGATTGAATTGGAAAGTTTAATAAAAGTTGGCGCAGTAGGAAGCAAAGTCATAGTGACAACACGTAGTAACTCAATTGCTTCAATGATGGAAAACGTTTCCTCGTATGTTTTAGATGGTCTTTCCCTTGAGAATTGTTTATCCCTGTTTGTCAAATTGGCATTTAAGGAAGGCCAAGAAAACAAATATCCAAATCTAGTGGAGATCGGGAATGAAATTGTGAAAAAATGCCAAGGGGTTCCTCTAGCGGTGAGAACATTAGCAAGTTCCCTTTTCTCAAAATTTGATTTGGATCAATGGGAATTTGTAAGAGACCATGAGGTATGGAATTTAAAACAAAAGAAGGATGACATTTTACCAGCTCTTAAGTTAAGCTATGATCAAATGCCATTCCATCTGAGGCATTGTTTTGCTTACTTTTCCCTTTTTCCCAAAGATTTTGACTTTTTTACTTCTAGAATTGGTAATCTTTGGGCGTCGCATGGATTACTTGAATCCAAGGATGGAAGTCAAAAGCCAGAGAATATTGCAAGACAATATATAGATGAGTTGTATTCAAGATCATTTCTTCAGGATTTTGTTGACTATGGCTACTTTTACTCTTTCAAAGTGCATGATTTGGTGCATGATCTTGCACAGTATGTTGCGAAAGAGGAGTTTCTAGTGGTAGACTCCCGTACTCGAAGTATACCTGAACAAGTAAGGCATTTATCAATTGTACAAAATGAGTCACTTAGCCATGCTTTGTTCCCCAAGTCCACAAGAGTGAGAACTATACTATCTCCCACGAAAAGAGTGGGTCTTGTTGGTAAAACTCTTTTAGATACATGGTTATCAAGATACAGATACTTACGTTATTTAGATTTAAGTGATTCTTCGTTTGAGACTCTACCTAATTCAGTTGATAAATTGGAGCATCTGCGAGTTCTCAATCTTTCCGGTAACTACAAAATCAAAAGACTTCCTCATTCTATATGCAAACTCCAAAATTTGCATGTATTGTCACTCGCAAGATGCATGGAGCTTGAAACACTGCCTAAAGGATTAGGGAATCTGATCAGCCTTCGACGACTGTGTATAACGACAAAACAATCTGTTCTGTCACAGAATGAAATTGCAAGCTTAAACAATCTTCAAACTTTGAGTTTTGAATATTGTGACAATTTGGAGTTTTCGTTCAATGAGGCACAACTCACTTCCCTTGAAGTATTGGAAGTTCTATCATGTGGGCGCCTTGGGTCTTTTCCTCTCTATATTCTCCCCAAATTGGAGGTTCTTCTAGTTAAAAACAGTCCAATGATGTCAGTGAACTATGAATGCCCACTCCAAAGATTGAGGATGAAATATCTGAATCTTAATGATTTTCCAGGGATAGAAACATTGCCTCCATGGATTCAAGGAGCTGCGGACACTTTACAGAGCTTGTTCATTTATAATTTTCCTAATCTCAAGAGGCTTCCTCAGTGGCTGACAACAATGGCTCATCTTAAGTTTCTAGGCATTTATAACTGTCCTGAACTGTTGTATCTTCCAAGTGACATGCATCGCCTCACTGCCCTTGAATATTTGGGAATACATGCTTGTCCTGAATTGTGTCGAAAATATCAGCCTCAATATGGTGTGTATTGGCCCATGATTGCTCACATCAAACGCCTTTACATTGGAGAACCATGA 2574 0.3901 MANSFVFDVAESLLNKLASHVYEEASRAYGVYDDLKGFKDTLLIVKAVLLDAEEKKELSHALREWLRQIHHVCSDAEDVLDGFDCQTLRKKVIEASGSTRMKVGHFFSKSNPLVFRIRMAHQIKQLKDRLDKVAADGNKFGLVHERIDVDHRLVVQRREMTYSHVDASNVIGRENDRENIIQLLMQPHSDGVKSLCVIPIVGIGGLGKTTLAKLVFNDKRIDEFFPLKMWVCVSNDFDIRQIIIKIINSASDSAASTALAHHENISNLDIEQLQGRLRHKLSGQKFLLVLDDIWNEDRAKWIELESLIKVGAVGSKVIVTTRSNSIASMMENVSSYVLDGLSLENCLSLFVKLAFKEGQENKYPNLVEIGNEIVKKCQGVPLAVRTLASSLFSKFDLDQWEFVRDHEVWNLKQKKDDILPALKLSYDQMPFHLRHCFAYFSLFPKDFDFFTSRIGNLWASHGLLESKDGSQKPENIARQYIDELYSRSFLQDFVDYGYFYSFKVHDLVHDLAQYVAKEEFLVVDSRTRSIPEQVRHLSIVQNESLSHALFPKSTRVRTILSPTKRVGLVGKTLLDTWLSRYRYLRYLDLSDSSFETLPNSVDKLEHLRVLNLSGNYKIKRLPHSICKLQNLHVLSLARCMELETLPKGLGNLISLRRLCITTKQSVLSQNEIASLNNLQTLSFEYCDNLEFSFNEAQLTSLEVLEVLSCGRLGSFPLYILPKLEVLLVKNSPMMSVNYECPLQRLRMKYLNLNDFPGIETLPPWIQGAADTLQSLFIYNFPNLKRLPQWLTTMAHLKFLGIYNCPELLYLPSDMHRLTALEYLGIHACPELCRKYQPQYGVYWPMIAHIKRLYIGEP 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3991g00046 857 Pfam Leucine rich repeat 583 639 IPR001611 GO:0005515
Gabi3991g00046 857 Pfam Rx N-terminal domain 10 96 IPR041118 -
Gabi3991g00046 857 SUPERFAMILY L domain-like 503 841 - -
Gabi3991g00046 857 Gene3D - 153 337 IPR027417 -
Gabi3991g00046 857 PANTHER DISEASE RESISTANCE PROTEIN RP 56 786 IPR044974 GO:0006952
Gabi3991g00046 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 439 IPR027417 -
Gabi3991g00046 857 Gene3D - 341 424 IPR042197 -
Gabi3991g00046 857 Gene3D - 425 514 IPR036388 -
Gabi3991g00046 857 PRINTS Disease resistance protein signature 377 391 - -
Gabi3991g00046 857 PRINTS Disease resistance protein signature 626 642 - -
Gabi3991g00046 857 PRINTS Disease resistance protein signature 197 212 - -
Gabi3991g00046 857 PRINTS Disease resistance protein signature 280 294 - -
Gabi3991g00046 857 Gene3D Ribonuclease Inhibitor 533 669 IPR032675 -
Gabi3991g00046 857 Gene3D - 10 124 - -
Gabi3991g00046 857 CDD RX-CC_like 12 134 IPR038005 -
Gabi3991g00046 857 Pfam NB-ARC domain 174 427 IPR002182 GO:0043531
Gabi3991g00046 857 Gene3D Ribonuclease Inhibitor 697 838 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3991g00046 Gabi-Chr3991 581947 585453 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3991g00046 198 831 WRKY Transcription Factor Family AT5G45050 21.634 1.30e-12 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3991g00046 - - gmx:100794422 1206.05