Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3991g00037 ATGGCTTCCTCTTCCTCCGATCCCGGCAAGTCGGCGGAGACTTCGGAACCTGCGGTGGCGAACGATCAGTTGTTACTGTATAGAGGATTGAAGAAAGCGAAGAAAGATAGAGGTTGCACCGCCAAAGAACGCATCAGCAAAATGCCTCCTTGTGCCGCCGGGAAACGCAGCTCCATATACCGTGGTGTCACCAGGCATAGATGGACTGGTCGTTATGAAGCGCATCTTTGGGATAAAAGTACATGGAACCAAAACCAGAATAAGAAAGGAAAGCAAGTTTACTTGGGGGCATATGATGATGAGGAAGCAGCAGCTAGAGCTTATGACCTTGCTGCTCTGAAATATTGGGGTCCTGGGACTCTCATCAACTTTCCGGTGACTGATTATGCAAGAGATCTTGAAGAAATGCAGAATGTTTCGAGAGAAGAATACCTTGCATCTTTACGGCGGTATGCTTTCTGCAGGAAGAGCAGTGGATTTTCAAGAGGATTATCAAAATACCGTGGACTCTCAAGTCGATGGGAGCCATCATATGGCCGTATGGCAGGATCTGATTACTTCAATAGTATACATTATGGTACAGGGGATGATTCTGCAGCTGAAAGTGAATATGTAAGTGGTTTCTGCTTAGAAAGAAAGATTGATTTAACAAGTCACATCAAGTGGTGGGGATCTAATAAGAGTCGACAACCTGATGCTGGAACAAGATTATCAGAAGAAAAGAAGCATGGTTTTGCTGGAGATATTTGCAGTGAACTTAAAACATTGGAACAGAAAGTCCAACCTACAGAACCATACCAGATGCCAGAGTTAGGCAGGCCCCACAATGATAAAAAGCATAGAAATTCTTCAGTCTCTGCCTTAAGTATCTTGTCACAATCTGCTGCTTACAAGAGCTTGCAAGAGAAAGCATCAAAGAGACAGGAAAATAGCACTGATAATGATGAGAATGAAAACAAAAACACAGTTAATAAGTTGGATCATGGCAAGGCAGTTGAGAAACCATCAAATCATGATGGTGGCAATGATCGACTTGACATTGCAATGGGAATGAGTGGGACGTTGTCTCTTCAAAGAAATGTTTACCCATTGACACCATTCTTGTCTGCACCGCTTTTGACAGCCTACAATACTGTTGATCCTTTGATAGATCCTGTTCTCTGGACATCTCTCGTTCCTATACTTCCTGCTGGCCTTTCTCGTACAGCTGAGGTTACAAAGACAGAGACCAGTTCTTCAACGTACACTATGTTTCAGCCAGAGGAGTGA 1269 0.4374 MASSSSDPGKSAETSEPAVANDQLLLYRGLKKAKKDRGCTAKERISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQVYLGAYDDEEAAARAYDLAALKYWGPGTLINFPVTDYARDLEEMQNVSREEYLASLRRYAFCRKSSGFSRGLSKYRGLSSRWEPSYGRMAGSDYFNSIHYGTGDDSAAESEYVSGFCLERKIDLTSHIKWWGSNKSRQPDAGTRLSEEKKHGFAGDICSELKTLEQKVQPTEPYQMPELGRPHNDKKHRNSSVSALSILSQSAAYKSLQEKASKRQENSTDNDENENKNTVNKLDHGKAVEKPSNHDGGNDRLDIAMGMSGTLSLQRNVYPLTPFLSAPLLTAYNTVDPLIDPVLWTSLVPILPAGLSRTAEVTKTETSSSTYTMFQPEE 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3991g00037 422 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 22 307 - -
Gabi3991g00037 422 Gene3D AP2/ERF domain 59 127 IPR036955 GO:0003700|GO:0006355
Gabi3991g00037 422 ProSiteProfiles AP2/ERF domain profile. 59 125 IPR001471 GO:0003700|GO:0006355
Gabi3991g00037 422 MobiDBLite consensus disorder prediction 299 345 - -
Gabi3991g00037 422 FunFam AP2-like ethylene-responsive transcription factor 58 127 - -
Gabi3991g00037 422 MobiDBLite consensus disorder prediction 302 341 - -
Gabi3991g00037 422 SUPERFAMILY DNA-binding domain 58 126 IPR016177 GO:0003677
Gabi3991g00037 422 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Gabi3991g00037 422 PRINTS Ethylene responsive element binding protein signature 107 127 IPR001471 GO:0003700|GO:0006355
Gabi3991g00037 422 SMART rav1_2 59 131 IPR001471 GO:0003700|GO:0006355
Gabi3991g00037 422 MobiDBLite consensus disorder prediction 259 285 - -
Gabi3991g00037 422 Pfam AP2 domain 59 117 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3991g00037 Gabi-Chr3991 504111 507965 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3991g00037 18 416 AP2-EREBP Transcription Factor Family AT2G41710 64.477 1.40e-166 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Gabi3991g00037 AP2 1.1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3991g00037 K09285 - gmx:100814117 760.37