Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3991g00036 ATGCCCTTGGAGGGGATTTTCATTGAACCCACTTCAACTAATAGTTCTATTCCTGATCTTTCCCTTCACATAAGCCCACCAAGCACATCTTCTTCTTCTTCTTCTTTGATTTGTAACAATCAAGCTCAAGTAGCTGGTGGTAACAACAATTATGAAGGCCACAATTCAGCTACCTCAAATTTCCCTTCAAGAAAAGTGTCTCAAGCTCACACTGAGCTTTCTCTTGGAAGGAATTTCAGTGGTGGTGGTGGTGAAGAAGGAGGAGGAGTACTTCATGAGGAATCACCACACAATAACCCTTATTATCAAAACCAACAACAGGTTCATTTCCATCATGGTGTTCCAACAACAACAACAAGTAGCACTACTAGTTCAAGTACTCATCACTTGAATCACATAAATTATGGTGTTTCATTGCTTGATGTGTCATCAGAAGGATTGAGGCCAATCAAGGGGATTCCAGTGTATCACAACCGTTCATTCCCTTTCTTACCCATGGATCATTCAAGAGACAAGGATCATCATCATCATCATAATCCCAAGATGTGCTTATATCATCACATGTCTTCATATCCCTCTTTGTCCTCTTCTTGTTCCTCTCTGTGTTCAACTCCTTCCACTTCTCCTTCACCATACTTTGGGGGTTTGGATCCCATGTCGTTCTTGAACTCAGGAGGCGGCGCGGGCGCCACCAACGGGTCGGCGGCGGCGTATAGGGCTGCCACTGCAACAAGGTTTAATGGGATTTCAAGTGAGGGTTTCAAATCTCATCCATTGCACCATCATCACTCACACTATGGGGTTGGACTTGGACCCTCCTCTCATCTTGAAGCTTCCTCTGGTTTTATGAGATCAAGGTTTTTGCCCAAGTTACCAACCAAGAGAAGCATGAGAGCACCAAGAATGCGTTGGACAAGCACCCTCCATGCTCGATTTGTTCATGCCGTTGAGCTTCTTGGTGGCCATGAAAGAGCTACTCCAAAGTCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACATTAGCTCATGTCAAAAGCCATTTGCAGATGTATCGAACTGTTAAGACCACTGACAAGCCTGCAGCTTCTTCAGGACTTTCAGATGGATCAGGAGAGGATGACATGTCTCCGATGGGAAGCAGCGGTGGTCTACGGCAATTTTCCGACCAAAGAGGGTTGCCGGATCGGCCAGTGCAACAAGATATGGACTACTCTTCGAGCACCACTTTATGGAGTAACTCTTCAAGCAGTAGAGAGCCATGGCCACAAACTAGTTCTAATGACATAGATGGTTTCAGATCACCTATCTTCCAGTCACAATCAATAGCAGGAGGGCATCAAGTTCAGGAGTGTGATTCAACTCAACTCAAGAACAGTTTGTCAGGATCTAATTTAGAGTGCAAGAACCCAAGTTTGGAGTTCACATTAGGCATACCAGATTGGAATGGCAAAGGACAAGCCTAA 1464 0.4481 MPLEGIFIEPTSTNSSIPDLSLHISPPSTSSSSSSLICNNQAQVAGGNNNYEGHNSATSNFPSRKVSQAHTELSLGRNFSGGGGEEGGGVLHEESPHNNPYYQNQQQVHFHHGVPTTTTSSTTSSSTHHLNHINYGVSLLDVSSEGLRPIKGIPVYHNRSFPFLPMDHSRDKDHHHHHNPKMCLYHHMSSYPSLSSSCSSLCSTPSTSPSPYFGGLDPMSFLNSGGGAGATNGSAAAYRAATATRFNGISSEGFKSHPLHHHHSHYGVGLGPSSHLEASSGFMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSGLSDGSGEDDMSPMGSSGGLRQFSDQRGLPDRPVQQDMDYSSSTTLWSNSSSSREPWPQTSSNDIDGFRSPIFQSQSIAGGHQVQECDSTQLKNSLSGSNLECKNPSLEFTLGIPDWNGKGQA 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3991g00036 487 Gene3D - 299 356 - -
Gabi3991g00036 487 MobiDBLite consensus disorder prediction 8 35 - -
Gabi3991g00036 487 MobiDBLite consensus disorder prediction 355 433 - -
Gabi3991g00036 487 NCBIfam myb-like DNA-binding domain, SHAQKYF class 300 353 IPR006447 GO:0003677
Gabi3991g00036 487 SUPERFAMILY Homeodomain-like 297 353 IPR009057 -
Gabi3991g00036 487 FunFam Myb family transcription factor 298 356 - -
Gabi3991g00036 487 MobiDBLite consensus disorder prediction 400 433 - -
Gabi3991g00036 487 MobiDBLite consensus disorder prediction 76 98 - -
Gabi3991g00036 487 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 18 484 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gabi3991g00036 487 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3991g00036 Gabi-Chr3991 427914 434004 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3991g00036 148 484 G2-like Transcription Factor Family AT5G16560 47.778 6.22e-78 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi3991g00036 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3991g00036 - - ccaj:109796302 630.557