Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3991g00011 ATGTGTTTTTCATCCAAATGCATTTCCATTCTCTCATGGGATGAGCAAGTGGATAAAGCTTACCAGCCAAAGTGGCTTGAGGATTTTCTGAGCAAAGCTTTCTTTGACCCATGTACAGCTCATCCTTCTTGTAGGAATGAGTTGAACAAATACTGTATAAACTGCAGTGTGTCAGTTTGCCAATATTGCGCTTCATCGAGTACTCATTGCCAGCACAAGATGCTTAAAATCTATAGACACCTTTTCACAGATGTTGTCGCCCTTGCTGCTATGGAGAAGCATTTTGACTGCTCACAAATTCAGCCCTACAAATGCAATAAGCGTTTGGTTATTGCTCTGAAGCCTCTTCCACACTGTGGTTCAGCAAAAAGGAATGAGGCATGCAATATCTGTGGTAGAAAGTTGGCTGAGCCTGATTTATATGACTACTGCTCCATTTCTTGCAAGGTCAAAGCTGTTTTAAGCAAGCTTAATGATTCAGTTCCTGCCTCCATTTCCACCCTGAGTCTTCATCAGGAAAACAAGGAGGAAACTACTGAACCCTCTAAGTGGGTTAACAAAAGAAAGAGAACAACACCCCGTAGAGCTCCTTTCTTCTAA 600 0.42 MCFSSKCISILSWDEQVDKAYQPKWLEDFLSKAFFDPCTAHPSCRNELNKYCINCSVSVCQYCASSSTHCQHKMLKIYRHLFTDVVALAAMEKHFDCSQIQPYKCNKRLVIALKPLPHCGSAKRNEACNICGRKLAEPDLYDYCSISCKVKAVLSKLNDSVPASISTLSLHQENKEETTEPSKWVNKRKRTTPRRAPFF 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3991g00011 199 SUPERFAMILY B-box zinc-binding domain 37 77 - -
Gabi3991g00011 199 MobiDBLite consensus disorder prediction 171 199 - -
Gabi3991g00011 199 Pfam PLATZ transcription factor 79 150 IPR006734 -
Gabi3991g00011 199 CDD Bbox2 38 77 - -
Gabi3991g00011 199 ProSiteProfiles Zinc finger B-box type profile. 38 77 IPR000315 GO:0008270
Gabi3991g00011 199 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 20 169 - -
Gabi3991g00011 199 MobiDBLite consensus disorder prediction 173 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3991g00011 Gabi-Chr3991 68662 81342 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Gabi3991g00011 PLATZ 5.3e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3991g00011 - - tcc:18601328 225.713