Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00090 ATGTTACAGAATTTGCTACTATTACTAATCGTCTTATGTCTCCATCGTTTGCCCATACTGACCCAAGGATCAAATCAACATGAAAGAAAGCCATATATTGTATACATGGGAGAACTACCAGCAGCAAGAACTTATCCCGTGGAATACCATCACGACAACTTGCTTGCATCTGCGATTGGAGACAAGCAGTTAGCCAGAGAGTCCAAAATACATAGCTACGGAAAGAGCTTCAACGGATTCGTTGCACGACTTTTGCCACATGAAGCAGAGAAACTGAAAGAGGAGGACAATGTGGTATCCGTGTTTCCAAATACATACCGTAAATTACACACAACAAGGTCATGGGATTTTCTGGGAATGCCCTTAAAAGTAAAGAGAAACCCCAACATAGAAAGTCATATCATTGTGGGCATGTTAGATACAGGTATTTGGGTTGATTGTCCCAGTTTCAATGATAAGGGGTATGGACCTCCCCCCAATAGATGGAAGGGAAAATGTGTAACGGGAGCCAACTTCACTGGCTGCAACAACAAGGTGATTGGAGCAAAATACTTCAATCTTGACCCAAGCGGTCCTGAAACTGACAATCTTAGTCCGGTGGACGATCAGGGCCACGGCACTCACACCGCCTCCACAGCTGCCGGCGTGGCGGTGAAGGATGCAAGTCTTTATGGCATTGGCAAAGGAACCGCACGCGGTGGCGTCCCTTCTGCTCGCATTGCCATGTACAAAGTTTGCTGGAGCATTGGTTGCAGCGACATGGACATGCTGGCTGGCTTCGACGAGGCCATAGCTGACGGCGTTAACTTCATATCAGTTTCCATTGGAGGGCCATCACGTGACTTTTTCAGTGACCCAATAGCCATTGGAGCATTTCACGCTATGAGGAAAGGGGTTCTCACTTCTTGCTCAGGTGGAAATGATGGTCCTCAACCTATGACAGTTGAGAACGTTGCACCCTGGATTTTGACGGTGGCAGCTTCCACAGTTGATCGGCAGTTCACGACGATGGTAACATTCGGTGACGGAAAGAACATTACAGGACTATCTATTAATACCTTTTCACTAGAGAAAAACATGTATCCATTGATTAATGGAATCCTTGCTGCGAACGGTAGTGGAGATGGCTATGGCTATGGCAGTGCTAGTGGTTGTGATTATGGGACTCTAAGCGAGGACAAGGTGAAGGGCAAAATAGTGTACTGCGTTGGAGGTATGGGTAGTCAGGACTTGACCATCAAAGAATTAGGGGGAGCAGGGACAATCATAGGCCTTGAAGAGAAAATAGACGCTTCCTACACCACAGTTATTCCAGGGACCTTTGTTGAAGCCAATACCATGGGCAAAACCATCGATCTCTACATCAATTCAACTAAGGATGCTCGAGCTGTTATTTACAAGACAACAAGTAAAAGAACACATGCTCCATATCTTGCTTCTTTTTCATCCAGAGGTCCTCAACGTATCACACCCAACATCCTCAAGCCTGACTTGGCTGCCCCAGGAATGGACATACTAGCTGCTTATTCCAAACTGGCAACAATAACAGGGTACCCTGAAGACAACCGTTATGATGTTTATAATATATTATCAGGAACATCTATGGCCTGCCCACATGCCATTGCAGCTGCTGCTTATGTCAAATCCTTCCACCCTGATTGGAGTCCTGCTGCAATTAAATCTGCTCTCATGACCACAGCTACTCCTATGAAAGTCAGTGACGATTATGCCGAGTTGGGATTTGGGTCAGGACAGATTAGTCCAGTAAGAGCAGTGCATCCTGGCCTACTATACAACATCCAAACGAACTCCTACATTGCCTTCTTATGCAAGCAAGACTACAACAGCACTAACATAGGTACACTAATTGGTAACAAAAGTTTCGATTGCGCAAGCATTAAGCCTGCGCGAGGCACTGATGGAATCAACTACCCTAGCATGCATATCCAGCTCCTCAGTGCTTATTCTAGAATTTCTGCAGTATTTCATAGGACTGTAACTAATGTAGGATATGGAACTTCAACCTATAAGGCTAAAGTCACAGCACCCAAGGGTCTTTCTGTAGAGGTTATCCCAAATACATTGCAGTTTAGTCAGTTACATCAAGACCTGTCATTCAAGGTTGTCCTGAAGGGGCCACCAATGCCCGATGAGACACAAATATTATCTGCATCACTTGAATGGAATGACTCTAAACACAGTGTCAGAAGTCCAATACTTGTCTTGAAGCCCACTTCATAA 2241 0.4525 MLQNLLLLLIVLCLHRLPILTQGSNQHERKPYIVYMGELPAARTYPVEYHHDNLLASAIGDKQLARESKIHSYGKSFNGFVARLLPHEAEKLKEEDNVVSVFPNTYRKLHTTRSWDFLGMPLKVKRNPNIESHIIVGMLDTGIWVDCPSFNDKGYGPPPNRWKGKCVTGANFTGCNNKVIGAKYFNLDPSGPETDNLSPVDDQGHGTHTASTAAGVAVKDASLYGIGKGTARGGVPSARIAMYKVCWSIGCSDMDMLAGFDEAIADGVNFISVSIGGPSRDFFSDPIAIGAFHAMRKGVLTSCSGGNDGPQPMTVENVAPWILTVAASTVDRQFTTMVTFGDGKNITGLSINTFSLEKNMYPLINGILAANGSGDGYGYGSASGCDYGTLSEDKVKGKIVYCVGGMGSQDLTIKELGGAGTIIGLEEKIDASYTTVIPGTFVEANTMGKTIDLYINSTKDARAVIYKTTSKRTHAPYLASFSSRGPQRITPNILKPDLAAPGMDILAAYSKLATITGYPEDNRYDVYNILSGTSMACPHAIAAAAYVKSFHPDWSPAAIKSALMTTATPMKVSDDYAELGFGSGQISPVRAVHPGLLYNIQTNSYIAFLCKQDYNSTNIGTLIGNKSFDCASIKPARGTDGINYPSMHIQLLSAYSRISAVFHRTVTNVGYGTSTYKAKVTAPKGLSVEVIPNTLQFSQLHQDLSFKVVLKGPPMPDETQILSASLEWNDSKHSVRSPILVLKPTS 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00090 746 Gene3D Peptidase S8/S53 domain 134 605 IPR036852 GO:0004252|GO:0006508
Gabi3986g00090 746 FunFam Subtilisin-like protease SBT1.5 133 348 - -
Gabi3986g00090 746 FunFam Subtilisin-like protease SBT5.3 20 110 - -
Gabi3986g00090 746 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Gabi3986g00090 746 Gene3D - 331 471 - -
Gabi3986g00090 746 ProSiteProfiles Serine proteases, subtilase domain profile. 114 592 - -
Gabi3986g00090 746 Pfam Fibronectin type-III domain 642 741 IPR041469 -
Gabi3986g00090 746 SUPERFAMILY Subtilisin-like 128 592 IPR036852 GO:0004252|GO:0006508
Gabi3986g00090 746 Pfam Peptidase inhibitor I9 32 110 IPR010259 -
Gabi3986g00090 746 CDD PA_subtilisin_like 338 465 - -
Gabi3986g00090 746 CDD Peptidases_S8_3 108 568 IPR034197 -
Gabi3986g00090 746 Gene3D - 609 743 - -
Gabi3986g00090 746 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 740 IPR045051 -
Gabi3986g00090 746 Pfam Subtilase family 132 582 IPR000209 GO:0006508|GO:0008236
Gabi3986g00090 746 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Gabi3986g00090 746 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Gabi3986g00090 746 PRINTS Subtilisin serine protease family (S8) signature 201 214 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00090 Gabi-Chr3986 640557 644463 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00090 3 566 Subtilisin-like Serine Gene Family AT5G03620 60.279 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00090 - - gmx:100793716 1160.59