Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00089 ATGAAGGGGGAGCAGGATGCTGATTTATCTAAGACTACAAGTTACTCTTTGGTTCGTGGCAGCAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAAGAAGAACGGAGGATACGCAGGGTATTGGCCAATAGAGAGTCAGCTAGGCAGACAATTCGTCGTAGGCAGGCTCTGTGTGAGGAGTTAACCAGAAAAGCCACCACTTTAGTTCTGGAGAATGAAAACCTGAAGAAGGAGAAGGAGTTGGCTTTGAAAGAGTATCAATCTTTGGAGACTACGAATAAGCACCTAAAGGCACAAATAGCCAAGTCAATATACACTGAAGTGGAGAAAACTCCCAATGAGCAGGAGTCATCTGTGGCTGAGGTAACACCTTTGTCTCGTAATAGTCCATGGTTTCTTTATAACCATTTCCCAGTTTCACAGTTATTTTGGCCTTCCATCCTTCAGTCTTCTAATCCAATTCAATTACAACATACAACAACAACCTCAGTTTTACCTCAAACTAGTTGGGGTGGGCCAGTTCAATTACAACATACACCATTTAATTCCATTGTCATTCCATCAAATGTTTATGTTCCATGTTCTTCTGAGTCTGAATCTTTTCACAAGCAAAATAACCTTACAAATGATAATCGAACACAACATCCATTGTGCTTGTTTCCATGTCCTTGGTTATTCCCTCTTCCAGAATTTGGAAATGGAAATTCACCAGCTTCCAGTGGCCCAAAAGATAAACACGATGAACTTCTTCTGGGTAAGCAATGTAGTTCTAGTTCATCTTTGAATACAGTGGCAAATATGGATTATCAAGCAGTTCAACCTATCAAACTTAAACCAGAAGTTTCTGGCTGGACAGAAGCTAGACCTAACAATCCAAGATTTCCTTTGAATGGAGGTAAGCAGAAAATAGGATGTCACATTATAGACAGTTTCCATGGACCCACACTTGTTTGTAATGGTCATGCTTCTGCTGTCGAGCAAGACCACAAGCTTCAATTACATTTTTCTCCCAACACTGAGGTATCTTCACCAGCTTCTCATATTGAAATTTCTTCATTGGAGAAGAAACAAGAACAGTTCATATGCCCAGGTAAAAATCTAGTGGATGCAGTTGCTGCAGCAGAGGCAAGAAAGAGGAGAAAGGAACTAACAAAGATAAAAAGCATCCATAACCGCCAGTCCCGGTTGCACTGTTGA 1197 0.4077 MKGEQDADLSKTTSYSLVRGSKSRRNLTEEEKEERRIRRVLANRESARQTIRRRQALCEELTRKATTLVLENENLKKEKELALKEYQSLETTNKHLKAQIAKSIYTEVEKTPNEQESSVAEVTPLSRNSPWFLYNHFPVSQLFWPSILQSSNPIQLQHTTTTSVLPQTSWGGPVQLQHTPFNSIVIPSNVYVPCSSESESFHKQNNLTNDNRTQHPLCLFPCPWLFPLPEFGNGNSPASSGPKDKHDELLLGKQCSSSSSLNTVANMDYQAVQPIKLKPEVSGWTEARPNNPRFPLNGGKQKIGCHIIDSFHGPTLVCNGHASAVEQDHKLQLHFSPNTEVSSPASHIEISSLEKKQEQFICPGKNLVDAVAAAEARKRRKELTKIKSIHNRQSRLHC 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00089 398 SMART brlzneu 31 95 IPR004827 GO:0003700|GO:0006355
Gabi3986g00089 398 CDD bZIP_plant_GBF1 41 87 IPR045314 GO:0003700|GO:0006355
Gabi3986g00089 398 MobiDBLite consensus disorder prediction 1 34 - -
Gabi3986g00089 398 PANTHER G-BOX-BINDING FACTOR 3-RELATED 7 187 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi3986g00089 398 MobiDBLite consensus disorder prediction 8 22 - -
Gabi3986g00089 398 SUPERFAMILY Leucine zipper domain 35 90 IPR046347 GO:0003700|GO:0006355
Gabi3986g00089 398 Coils Coil 30 99 - -
Gabi3986g00089 398 Pfam bZIP transcription factor 31 93 IPR004827 GO:0003700|GO:0006355
Gabi3986g00089 398 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 33 96 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00089 Gabi-Chr3986 635712 639730 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00089 21 398 bZIP Transcription Factor Family AT1G19490 35.356 9.82e-49 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3986g00089 bZIP_1 8.2e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00089 - - gmx:100788624 514.612