Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi3986g00088 | ATGGATTCGGAATCACAGAAGCGCTCTGCATCGAGTTCTTCTTCTTCTTCTTTCTCCTCGTGCGCGTCGGAGGATCGGCGCGTCGAGACAGAGGAGATTGAAGCGGCGGAGACTCTGGCTGACCTGGCACAGTTGGCAATGCTCGAGACTGACTCTGCCGGTAAATGGTGCAGCAACGAAGCCAAACGAGACACCAGGCGATTCACGCGCGAGTCACCGACTCCTGACTCGGATCTCTCTCACTCTCCCCCTGCGCCTGGGGCTGTTACAGGTCAGCATCAAGATGAAAAAATATCTACAACTACATCCGCAGAAACAGAAAGGATTCAGAAGGATGACTGCTCTAGACATATGAAGGGGGAGCAGGATGCTGATTTATCTAAGACTACAAGTTACTCTTTGGTTCGTGGCAGCAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAAGAAGAACGGAGGATACGCAGGGTATTGGCCAATAGAGAGTCAGCTAGGCAGACAATTCGTCGTAGGCAGGCTCTGTGTGAGGAGTTAACCAGAAAAGCCACCACTTTAGTTCTGGAGAATGAAAACCTGAAGAAGGAGAAGGAGTTGGCTTTGAAAGAGTATCAATCTTTGGAGACTACGAATAAGCACCTAAAGGCACAAATAGCCAAGTCAATATACACTGAAGTGGAGAAAACTCCCAATGAGCAGGAGTCATCTGTGGCTGAGGTAACACCTTTGTCTCGTAATAGTCCATGGTTTCTTTATAACCATTTCCCAGTTTCACAGTTATTTTGGCCTTCCATCCTTCAGTCTTCTAATCCAATTCAATTACAACATACAACAACAACCTCAGTTTTACCTCAAACTAGTTGGGGTGGGCCAGTTCAATTACAACATACACCATTTAATTCCATTGTCATTCCATCAAATGTTTATGTTCCATGTTCTTCTGAGTCTGAATCTTTTCACAAGCAAAATAACCTTACAAATGATAATCGAACACAACATCCATTGTGCTTGTTTCCATGTCCTTGGTTATTCCCTCTTCCAGAATTTGGAAATGGAAATTCACCAGCTTCCAGTGGCCCAAAAGATAAACACGATGAACTTCTTCTGGGTAAGCAATGTAGTTCTAGTTCATCTTTGAATACAGTGGCAAATATGGATTATCAAGCAGTTCAACCTATCAAACTTAAACCAGAAGTTTCTGGCTGGACAGAAGCTAGACCTAACAATCCAAGATTTCCTTTGAATGGAGGTAAGCAGAAAATAGGATGTCACATTATAGACAGTTTCCATGGACCCACACTTGTTTGTAATGGTCATGCTTCTGCTGTCGAGCAAGACCACAAGCTTCAATTACATTTTTCTCCCAACACTGAGGTATCTTCACCAGCTTCTCATATTGAAATTTCTTCATTGGAGAAGAAACAAGAACAGTTCATATGCCCAGGTAAAAATCTAGTGGATGCAGTTGCTGCAGCAGAGGCAAGAAAGAGGAGAAAGGAACTAACAAAGATAAAAAGCATCCATAACCGCCAGTCCCGGTTGCACTGTTGA | 1548 | 0.4367 | MDSESQKRSASSSSSSSFSSCASEDRRVETEEIEAAETLADLAQLAMLETDSAGKWCSNEAKRDTRRFTRESPTPDSDLSHSPPAPGAVTGQHQDEKISTTTSAETERIQKDDCSRHMKGEQDADLSKTTSYSLVRGSKSRRNLTEEEKEERRIRRVLANRESARQTIRRRQALCEELTRKATTLVLENENLKKEKELALKEYQSLETTNKHLKAQIAKSIYTEVEKTPNEQESSVAEVTPLSRNSPWFLYNHFPVSQLFWPSILQSSNPIQLQHTTTTSVLPQTSWGGPVQLQHTPFNSIVIPSNVYVPCSSESESFHKQNNLTNDNRTQHPLCLFPCPWLFPLPEFGNGNSPASSGPKDKHDELLLGKQCSSSSSLNTVANMDYQAVQPIKLKPEVSGWTEARPNNPRFPLNGGKQKIGCHIIDSFHGPTLVCNGHASAVEQDHKLQLHFSPNTEVSSPASHIEISSLEKKQEQFICPGKNLVDAVAAAEARKRRKELTKIKSIHNRQSRLHC | 515 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi3986g00088 | 515 | MobiDBLite | consensus disorder prediction | 56 | 74 | - | - | |
Gabi3986g00088 | 515 | CDD | bZIP_plant_GBF1 | 158 | 204 | IPR045314 | GO:0003700|GO:0006355 | |
Gabi3986g00088 | 515 | SUPERFAMILY | Leucine zipper domain | 152 | 207 | IPR046347 | GO:0003700|GO:0006355 | |
Gabi3986g00088 | 515 | MobiDBLite | consensus disorder prediction | 49 | 149 | - | - | |
Gabi3986g00088 | 515 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Gabi3986g00088 | 515 | MobiDBLite | consensus disorder prediction | 125 | 139 | - | - | |
Gabi3986g00088 | 515 | PANTHER | G-BOX-BINDING FACTOR 3-RELATED | 6 | 250 | IPR044827 | GO:0003700|GO:0006355|GO:0043565 | |
Gabi3986g00088 | 515 | Coils | Coil | 147 | 216 | - | - | |
Gabi3986g00088 | 515 | MobiDBLite | consensus disorder prediction | 100 | 124 | - | - | |
Gabi3986g00088 | 515 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 21 | - | - | |
Gabi3986g00088 | 515 | SMART | brlzneu | 148 | 212 | IPR004827 | GO:0003700|GO:0006355 | |
Gabi3986g00088 | 515 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 150 | 213 | IPR004827 | GO:0003700|GO:0006355 | |
Gabi3986g00088 | 515 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Gabi3986g00088 | 515 | Pfam | bZIP transcription factor | 148 | 210 | IPR004827 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi3986g00088 | Gabi-Chr3986 | 635457 | 639730 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi3986g00088 | 51 | 515 | bZIP Transcription Factor Family | AT1G19490 | 33.543 | 1.12e-49 | 176 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bZIP | Gabi3986g00088 | bZIP_1 | 1.2e-07 | CL0018 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi3986g00088 | - | - | gmx:778152 | 596.66 |