Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00088 ATGGATTCGGAATCACAGAAGCGCTCTGCATCGAGTTCTTCTTCTTCTTCTTTCTCCTCGTGCGCGTCGGAGGATCGGCGCGTCGAGACAGAGGAGATTGAAGCGGCGGAGACTCTGGCTGACCTGGCACAGTTGGCAATGCTCGAGACTGACTCTGCCGGTAAATGGTGCAGCAACGAAGCCAAACGAGACACCAGGCGATTCACGCGCGAGTCACCGACTCCTGACTCGGATCTCTCTCACTCTCCCCCTGCGCCTGGGGCTGTTACAGGTCAGCATCAAGATGAAAAAATATCTACAACTACATCCGCAGAAACAGAAAGGATTCAGAAGGATGACTGCTCTAGACATATGAAGGGGGAGCAGGATGCTGATTTATCTAAGACTACAAGTTACTCTTTGGTTCGTGGCAGCAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAAGAAGAACGGAGGATACGCAGGGTATTGGCCAATAGAGAGTCAGCTAGGCAGACAATTCGTCGTAGGCAGGCTCTGTGTGAGGAGTTAACCAGAAAAGCCACCACTTTAGTTCTGGAGAATGAAAACCTGAAGAAGGAGAAGGAGTTGGCTTTGAAAGAGTATCAATCTTTGGAGACTACGAATAAGCACCTAAAGGCACAAATAGCCAAGTCAATATACACTGAAGTGGAGAAAACTCCCAATGAGCAGGAGTCATCTGTGGCTGAGGTAACACCTTTGTCTCGTAATAGTCCATGGTTTCTTTATAACCATTTCCCAGTTTCACAGTTATTTTGGCCTTCCATCCTTCAGTCTTCTAATCCAATTCAATTACAACATACAACAACAACCTCAGTTTTACCTCAAACTAGTTGGGGTGGGCCAGTTCAATTACAACATACACCATTTAATTCCATTGTCATTCCATCAAATGTTTATGTTCCATGTTCTTCTGAGTCTGAATCTTTTCACAAGCAAAATAACCTTACAAATGATAATCGAACACAACATCCATTGTGCTTGTTTCCATGTCCTTGGTTATTCCCTCTTCCAGAATTTGGAAATGGAAATTCACCAGCTTCCAGTGGCCCAAAAGATAAACACGATGAACTTCTTCTGGGTAAGCAATGTAGTTCTAGTTCATCTTTGAATACAGTGGCAAATATGGATTATCAAGCAGTTCAACCTATCAAACTTAAACCAGAAGTTTCTGGCTGGACAGAAGCTAGACCTAACAATCCAAGATTTCCTTTGAATGGAGGTAAGCAGAAAATAGGATGTCACATTATAGACAGTTTCCATGGACCCACACTTGTTTGTAATGGTCATGCTTCTGCTGTCGAGCAAGACCACAAGCTTCAATTACATTTTTCTCCCAACACTGAGGTATCTTCACCAGCTTCTCATATTGAAATTTCTTCATTGGAGAAGAAACAAGAACAGTTCATATGCCCAGGTAAAAATCTAGTGGATGCAGTTGCTGCAGCAGAGGCAAGAAAGAGGAGAAAGGAACTAACAAAGATAAAAAGCATCCATAACCGCCAGTCCCGGTTGCACTGTTGA 1548 0.4367 MDSESQKRSASSSSSSSFSSCASEDRRVETEEIEAAETLADLAQLAMLETDSAGKWCSNEAKRDTRRFTRESPTPDSDLSHSPPAPGAVTGQHQDEKISTTTSAETERIQKDDCSRHMKGEQDADLSKTTSYSLVRGSKSRRNLTEEEKEERRIRRVLANRESARQTIRRRQALCEELTRKATTLVLENENLKKEKELALKEYQSLETTNKHLKAQIAKSIYTEVEKTPNEQESSVAEVTPLSRNSPWFLYNHFPVSQLFWPSILQSSNPIQLQHTTTTSVLPQTSWGGPVQLQHTPFNSIVIPSNVYVPCSSESESFHKQNNLTNDNRTQHPLCLFPCPWLFPLPEFGNGNSPASSGPKDKHDELLLGKQCSSSSSLNTVANMDYQAVQPIKLKPEVSGWTEARPNNPRFPLNGGKQKIGCHIIDSFHGPTLVCNGHASAVEQDHKLQLHFSPNTEVSSPASHIEISSLEKKQEQFICPGKNLVDAVAAAEARKRRKELTKIKSIHNRQSRLHC 515
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00088 515 MobiDBLite consensus disorder prediction 56 74 - -
Gabi3986g00088 515 CDD bZIP_plant_GBF1 158 204 IPR045314 GO:0003700|GO:0006355
Gabi3986g00088 515 SUPERFAMILY Leucine zipper domain 152 207 IPR046347 GO:0003700|GO:0006355
Gabi3986g00088 515 MobiDBLite consensus disorder prediction 49 149 - -
Gabi3986g00088 515 MobiDBLite consensus disorder prediction 1 32 - -
Gabi3986g00088 515 MobiDBLite consensus disorder prediction 125 139 - -
Gabi3986g00088 515 PANTHER G-BOX-BINDING FACTOR 3-RELATED 6 250 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi3986g00088 515 Coils Coil 147 216 - -
Gabi3986g00088 515 MobiDBLite consensus disorder prediction 100 124 - -
Gabi3986g00088 515 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Gabi3986g00088 515 SMART brlzneu 148 212 IPR004827 GO:0003700|GO:0006355
Gabi3986g00088 515 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 150 213 IPR004827 GO:0003700|GO:0006355
Gabi3986g00088 515 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3986g00088 515 Pfam bZIP transcription factor 148 210 IPR004827 GO:0003700|GO:0006355
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi3986g00088 Gabi-Chr3986 635457 639730 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00088 51 515 bZIP Transcription Factor Family AT1G19490 33.543 1.12e-49 176
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3986g00088 bZIP_1 1.2e-07 CL0018
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00088 - - gmx:778152 596.66