Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00087 ATGGATTCGGAATCACAGAAGCGCTCTGCATCGAGTTCTTCTTCTTCTTCTTTCTCCTCGTGCGCGTCGGAGGATCGGCGCGTCGAGACAGAGGAGATTGAAGCGGCGGAGACTCTGGCTGACCTGGCACAGTTGGCAATGCTCGAGACTGACTCTGCCGGTAAATGGTGCAGCAACGAAGCCAAACGAGACACCAGGCGATTCACGCGCGAGTCACCGACTCCTGACTCGGATCTCTCTCACTCTCCCCCTGCGCCTGGGGGCCAGGCTGTTACAGGTCAGCATCAAGATGAAAAAATATCTACAACTACATCCGCAGAAACAGAAAGGATTCAGAAGGATGACTGCTCTAGACATATGAAGGGGGAGCAGGATGCTGATTTATCTAAGACTACAAGTTACTCTTTGGTTCGTGGCAGCAAGTCAAGGCGTAATTTAACTGAGGAAGAAAAAGAAGAACGGAGGATACGCAGGGTATTGGCCAATAGAGAGTCAGCTAGGCAGACAATTCGTCGTAGGCAGGCTCTGTGTGAGGAGTTAACCAGAAAAGCCACCACTTTAGTTCTGGAGAATGAAAACCTGAAGAAGGAGAAGGAGTTGGCTTTGAAAGAGTATCAATCTTTGGAGACTACGAATAAGCACCTAAAGGCACAAATAGCCAAGTCAATATACACTGAAGTGGAGAAAACTCCCAATGAGCAGGAGTCATCTGTGGCTGAGGTAACACCTTTGTCTCGTAATAGTCCATGGTTTCTTTATAACCATTTCCCAGTTTCACAGTTATTTTGGCCTTCCATCCTTCAGTCTTCTAATCCAATTCAATTACAACATACACCATTTAATTCCATTGTCATTCCATCAAATGTTTATGTTCCATGTTCTTCTGAGTCTGAATCTTTTCACAAGCAAAATAACCTTACAAATGATAATCGAACACAACATCCATTGTGCTTGTTTCCATGTCCTTGGTTATTCCCTCTTCCAGAATTTGGAAATGGAAATTCACCAGCTTCCAGTGGCCCAAAAGATAAACACGATGAACTTCTTCTGGGTAAGCAATGTAGTTCTAGTTCATCTTTGAATACAGTGGCAAATATGGATTATCAAGCAGTTCAACCTATCAAACTTAAACCAGAAGTTTCTGGCTGGACAGAAGCTAGACCTAACAATCCAAGATTTCCTTTGAATGGAGGTAAGCAGAAAATAGGATGTCACATTATAGACAGTTTCCATGGACCCACACTTGTTTGTAATGGTCATGCTTCTGCTGTCGAGCAAGACCACAAGCTTCAATTACATTTTTCTCCCAACACTGAGGTATCTTCACCAGCTTCTCATATTGAAATTTCTTCATTGGAGAAGAAACAAGAACAGTTCATATGCCCAGGTAAAAATCTAGTGGATGCAGTTGCTGCAGCAGAGGCAAGAAAGAGGAGAAAGGAACTAACAAAGATAAAAAGCATCCATAACCGCCAGTCCCGGTTGCACTGTTGA 1494 0.4391 MDSESQKRSASSSSSSSFSSCASEDRRVETEEIEAAETLADLAQLAMLETDSAGKWCSNEAKRDTRRFTRESPTPDSDLSHSPPAPGGQAVTGQHQDEKISTTTSAETERIQKDDCSRHMKGEQDADLSKTTSYSLVRGSKSRRNLTEEEKEERRIRRVLANRESARQTIRRRQALCEELTRKATTLVLENENLKKEKELALKEYQSLETTNKHLKAQIAKSIYTEVEKTPNEQESSVAEVTPLSRNSPWFLYNHFPVSQLFWPSILQSSNPIQLQHTPFNSIVIPSNVYVPCSSESESFHKQNNLTNDNRTQHPLCLFPCPWLFPLPEFGNGNSPASSGPKDKHDELLLGKQCSSSSSLNTVANMDYQAVQPIKLKPEVSGWTEARPNNPRFPLNGGKQKIGCHIIDSFHGPTLVCNGHASAVEQDHKLQLHFSPNTEVSSPASHIEISSLEKKQEQFICPGKNLVDAVAAAEARKRRKELTKIKSIHNRQSRLHC 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00087 497 Coils Coil 149 218 - -
Gabi3986g00087 497 MobiDBLite consensus disorder prediction 56 74 - -
Gabi3986g00087 497 MobiDBLite consensus disorder prediction 102 126 - -
Gabi3986g00087 497 SUPERFAMILY Leucine zipper domain 154 209 IPR046347 GO:0003700|GO:0006355
Gabi3986g00087 497 PANTHER G-BOX-BINDING FACTOR 3-RELATED 6 286 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi3986g00087 497 SMART brlzneu 150 214 IPR004827 GO:0003700|GO:0006355
Gabi3986g00087 497 MobiDBLite consensus disorder prediction 49 151 - -
Gabi3986g00087 497 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 152 215 IPR004827 GO:0003700|GO:0006355
Gabi3986g00087 497 CDD bZIP_plant_GBF1 160 206 IPR045314 GO:0003700|GO:0006355
Gabi3986g00087 497 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Gabi3986g00087 497 MobiDBLite consensus disorder prediction 1 33 - -
Gabi3986g00087 497 MobiDBLite consensus disorder prediction 127 141 - -
Gabi3986g00087 497 MobiDBLite consensus disorder prediction 1 23 - -
Gabi3986g00087 497 Pfam bZIP transcription factor 150 212 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00087 Gabi-Chr3986 635457 639730 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00087 51 497 bZIP Transcription Factor Family AT1G19490 34.279 1.46e-51 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi3986g00087 bZIP_1 1.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00087 - - gmx:778152 614.764