Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00084 ATGAAGGTGATCGCCGCCTATTTACTTGCCGTGTTGGGAGGGAACACGACCCCTTCCGCCGATGACCTAAAGGACATCCTTGGCTCTGGTATACCTTTTCTTTTTCCAATTTCAACCCTTCATGATAAACCTTTATTTTGTTTCATTTTTTCTCAATCATTGTCGTTTGGAGCAGAAGCGGATGATGATAACATCGGCGTTCTCTTGTCTGAATTGAAGGGTAAAGACATAGCAGAGGTTATTGCCTCCGGCAGGGAAAAGTTAGCCTCAGTTCCTTCTGGTGGTGGTGGTGCCGCCGTTGCCGTCGCTGCTGCTTCTGGTGGTGGCGGTGGCGCTGCTGCTCCAGCAGCCGCCGAATCAAAGAAAGAGGAAAAGGTGGAGGAAAAAGAGGAATCAGACGATGACATGGGTTTCAGTCTCTTTGATTAA 429 0.4848 MKVIAAYLLAVLGGNTTPSADDLKDILGSGIPFLFPISTLHDKPLFCFIFSQSLSFGAEADDDNIGVLLSELKGKDIAEVIASGREKLASVPSGGGGAAVAVAAASGGGGGAAAPAAAESKKEEKVEEKEESDDDMGFSLFD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00084 142 Gene3D - 1 31 IPR038716 -
Gabi3986g00084 142 Gene3D - 53 85 IPR038716 -
Gabi3986g00084 142 MobiDBLite consensus disorder prediction 105 142 - -
Gabi3986g00084 142 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 1 142 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gabi3986g00084 142 Pfam 60s Acidic ribosomal protein 56 141 - -
Gabi3986g00084 142 CDD Ribosomal_P2 1 91 IPR044076 GO:0002182|GO:0003735|GO:0022625
Gabi3986g00084 142 Hamap 50S ribosomal protein L12 [rpl12]. 2 142 IPR027534 GO:0003735|GO:0005840|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00084 Gabi-Chr3986 626352 627365 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00084 1 142 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 52.113 1.99e-25 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00084 K02943 - jre:108984253 114.005