Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00079 ATGGGTTCATCCTCTGGCACATGTGAAATAGTTGAAGAAAGGGAAGAGCTAAATACTGGGAAAGCTGTTGGGATTTATCTGTCCAATTCTGAGAATAGCACGTCTGAGAAAAATCAGAAGCTTTCAGCGCTGAAACTGGGAAACAAGGATAATCTAGATGATGATATTAATAAGCTGTTTGAATCAATTGCTCTTAAATCTTCAACAAGGGATTTGGGTGTTTTACGAGATGGTACAAGCCCTAAGATGAAAAATGTATTGAAAAATCAAAACGCAACGTATATTTCTCGGTCCCCACGAGTTGGGAGTTCTGAACATGTTAATTTAAAGCAGGCATTAAGAGAACTTTGCATATCTAAGGCATCAGAAATGGCTGCTATGAAACGATTATCAAAGTCAACGGCTTCTCCAAGAATATCAGAGGGTGAGAAGATACAGACATTGTATAATTCGGTTCTAGCTGGAACTAGTCGATCTGGGCCTGCTTTTGTTGAGAATAAGGGGAGTATAATTGAAATATCTCTAGTGCCAGAAAAAAGCAAGTCATTTTCCTTGGAGAAAACATCTCAATCTCATCAAACTGCCCAAATTAAATCACCGAGCCAAAACATTCATTCTTCTTGGGAAATTGCTGTTGCAACTACTCAACATGATTCTGGGACTTCATTGATGCAAAGTGATTTGGCATGTTCATCAAGTAAAGTTGGGGTTCAACCACTGCAAGGTGTGCCTGTTCTGACAGAAAAAGAAACATCTGCATCTTCTCCTCCTCTTTATAATATGTCCGGAAGCAAACTAGAGTTGTCCAAAAATGCTTCTTCCCCTAAAAAGTCAGGAAAGAAAGCGTTTGTGTCAAATACTGGGCGGAAAGTTAGGTTGCAAACACTATCTTCATCTACTTCTGTGAATGGAAACAGAGTTAACAAACTGCCACGCCATGGCCCCCGAACAGTTAAATCAGTCATCAAGAACAAGAATCTGAGTAAGAAGAACCTGGAGGAGGATTCAGGTTCTGCTTTATATGATCCTACATCCAATGAAGTTATTAAGTTAGTTCCTGGTACAACTCGGCTGGTTTGTGAGAGATGTAGGTGTGCTTTAGAAAATACAAGTGAAGAAAAAAATCAAGATATTATGGCATCGGACTCTACCAGTCTTGGGAATGGAGTAATCTTGAGTAATGTGCACTCTGGTTCAAATAAACCTGGTTTGGAATCAACTAGCAGTAATAAAAACAGGGCAGTTGCAAAAGTGAAGAAGAACACCAAGTTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAATAGTAGTCAAGGTGAGTACAGTAGTAGTACAAGTACCAGTGATGAGAGCAATGCGAGTGGCTCAAGTTGTGGCACTAGGCCTCACATGTCAAATGATGTTAGATGGGAAGCCATACGACATGCTCAAATACAGCATGGGGTATTGGGCTTGAGACACTTCAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGGGTCGTATATCTTGCTGAACTAATTGGCACAAGTTGCTTGTTTGCTATTAAGGTCATGGACAATGAATTTTTGGTGAGAAGGAAGAAGATGCCTAGGGCTCAAACTGAAAAAGAAATATTAAGGATGCTGGATCATCCATTTCTTCCCACACTGTATTTGCAATTTACATCAGATAATCTGTCATGTCTGGTCATGGAGTATTGTCCAGGTGGAGATCTTCATGTACTAAGGCAGAAGCAGCTTGGTAGAAGTTTTTCTGAGCCAGCAGCAAGGTTCTATGTTGCTGAAGTCCTTCTCGCTTTGGAGTACTTGCACATGCTTGGGGTTGTTTACCGTGATTTGAAACCTGAAAACATTCTTGTCCGAGAAGACGGCCACATTATGCTCACAGATTTTGATCTGTCACTGAGGTGTGCTGTTAGCCCAACGCTTCTGAAATCATCTTCTGATGTTGACCCTGCAAAAATATCGGGTCTTAGTGCACAGTCAAGTTGCATTGAGCCATTCTGCATTGAGCCATCTTGTCAGGTTCCATGCTTCAGCCCTAGATTCTTACCTGCTGCTGCAAAAGCAAGGAAATTAAAAGTTGACCTTGCTGCCCAGATCAGATCATTGCCACAGCTTGTGGCCGAGCCCACTGATGCAAGATCAAACTCATTTGTTGGTACACATGAATACTTGGCGCCTGAGATCATCAAAGAAGAGGGACATGGAGCTGCAGTTGACTGGTGGACATTTGGTGTTTTTCTATATGAGCTTTTATATGGTAGAACACCCTTTAAAGGTTCTAACAATGAAGAAACATTAGGGAACGTTATGTTGCAAAATCTTAGATTCCCTGACAGTCCAACTGTTAGTTTCCAAGCCAGGGATCTGATTAGCAGGTTGTTGGTTAAAGAGCCTGAAAACCGTTTGGGTTCAGAGAAAGGGGCTGCTGAGATTAAACAGCATCCTTTCTTTGATGGCCTTAACTGGGCCTTAATACGTTGTTCTGCCCCACCAGAACTTCCAGAGCTTTGTTATTTTGGAGTTTCAGACATGACCTCACAGGGCAAGGGTGCTATGTATTTAGAGTGTAAAGCAACAGGAGAGCATGTGGAATTCGAGTTGTTTTAA 2616 0.4125 MGSSSGTCEIVEEREELNTGKAVGIYLSNSENSTSEKNQKLSALKLGNKDNLDDDINKLFESIALKSSTRDLGVLRDGTSPKMKNVLKNQNATYISRSPRVGSSEHVNLKQALRELCISKASEMAAMKRLSKSTASPRISEGEKIQTLYNSVLAGTSRSGPAFVENKGSIIEISLVPEKSKSFSLEKTSQSHQTAQIKSPSQNIHSSWEIAVATTQHDSGTSLMQSDLACSSSKVGVQPLQGVPVLTEKETSASSPPLYNMSGSKLELSKNASSPKKSGKKAFVSNTGRKVRLQTLSSSTSVNGNRVNKLPRHGPRTVKSVIKNKNLSKKNLEEDSGSALYDPTSNEVIKLVPGTTRLVCERCRCALENTSEEKNQDIMASDSTSLGNGVILSNVHSGSNKPGLESTSSNKNRAVAKVKKNTKLKEQLEFSQSSNSSQGEYSSSTSTSDESNASGSSCGTRPHMSNDVRWEAIRHAQIQHGVLGLRHFNLLKKLGCGDIGVVYLAELIGTSCLFAIKVMDNEFLVRRKKMPRAQTEKEILRMLDHPFLPTLYLQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFSEPAARFYVAEVLLALEYLHMLGVVYRDLKPENILVREDGHIMLTDFDLSLRCAVSPTLLKSSSDVDPAKISGLSAQSSCIEPFCIEPSCQVPCFSPRFLPAAAKARKLKVDLAAQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKEEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLGNVMLQNLRFPDSPTVSFQARDLISRLLVKEPENRLGSEKGAAEIKQHPFFDGLNWALIRCSAPPELPELCYFGVSDMTSQGKGAMYLECKATGEHVEFELF 871
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00079 871 MobiDBLite consensus disorder prediction 389 415 - -
Gabi3986g00079 871 FunFam Serine/threonine-protein kinase D6PK-like 486 571 - -
Gabi3986g00079 871 Gene3D Phosphorylase Kinase; domain 1 486 567 - -
Gabi3986g00079 871 CDD STKc_phototropin_like 486 839 - -
Gabi3986g00079 871 MobiDBLite consensus disorder prediction 248 340 - -
Gabi3986g00079 871 SUPERFAMILY Protein kinase-like (PK-like) 462 845 IPR011009 -
Gabi3986g00079 871 FunFam serine/threonine-protein kinase D6PK-like 572 639 - -
Gabi3986g00079 871 PANTHER FLIPPASE KINASE 1-RELATED 270 839 - -
Gabi3986g00079 871 Pfam Protein kinase domain 489 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3986g00079 871 Pfam Protein kinase domain 717 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3986g00079 871 Gene3D Transferase(Phosphotransferase) domain 1 713 835 - -
Gabi3986g00079 871 MobiDBLite consensus disorder prediction 427 462 - -
Gabi3986g00079 871 MobiDBLite consensus disorder prediction 288 307 - -
Gabi3986g00079 871 FunFam serine/threonine-protein kinase D6PK-like 715 838 - -
Gabi3986g00079 871 MobiDBLite consensus disorder prediction 248 281 - -
Gabi3986g00079 871 SMART serkin_6 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3986g00079 871 ProSitePatterns Serine/Threonine protein kinases active-site signature. 609 621 IPR008271 GO:0004672|GO:0006468
Gabi3986g00079 871 MobiDBLite consensus disorder prediction 389 462 - -
Gabi3986g00079 871 Gene3D Transferase(Phosphotransferase) domain 1 568 636 - -
Gabi3986g00079 871 ProSiteProfiles Protein kinase domain profile. 488 820 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00079 Gabi-Chr3986 613253 616962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00079 1 871 AGC Kinase Gene Family AT2G36350 50.993 0.0 841
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gabi3986g00079 Pkinase 5.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00079 - K08286 gmx:100792120 1335.09