Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00047 ATGACCATGCTTGTTCTGTTGAGCAATATGGCTGAACTTGTCCATCGTCCATGGTTAAAACAACATTCAAATGCTAACGAGTTGCCAAGTGATTTAATTGTTGCACAAAATGCACTATGCATGGATGCAGAGTTAGAATGGCAACCTAGAAAAGGCAATACATTTAGTACTTTAGAAGAGGCATGGAAATTTTGGACTGAATATAGGGGTGTTCGTAGAGTAGACAAAAGGGATCATTTAACTATCAATCCTCAACTTGAAACTAGAACAAATTGTCCGGTGAAATTAGGACTGAAATACATGAAAGATATTGAGAAGTATCAAATTTATGATTTTTGCGATGAGCATAACCATCCTTTGCATCTTCTGCAGACAAGTCACATGCTATTATCTCAAAGAAAATTGTCTCAAGTTCAATCTCATGAGATTGATTTGGCTAATGATTCAGGCCTTAAGCAAAAGACTTCATTTGAATTAATGAGTAGACAAGTTGGTGAAAGAGAAAACCTTGGTTACACATGCTTGGATCAAAAGAATTATCTTTGTAGCAAAAGGTTGAGAAATATGGCATATGGGGAGGCATGA 585 0.3624 MTMLVLLSNMAELVHRPWLKQHSNANELPSDLIVAQNALCMDAELEWQPRKGNTFSTLEEAWKFWTEYRGVRRVDKRDHLTINPQLETRTNCPVKLGLKYMKDIEKYQIYDFCDEHNHPLHLLQTSHMLLSQRKLSQVQSHEIDLANDSGLKQKTSFELMSRQVGERENLGYTCLDQKNYLCSKRLRNMAYGEA 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00047 194 PANTHER OS01G0519700 PROTEIN 69 187 - -
Gabi3986g00047 194 Pfam FAR1 DNA-binding domain 63 120 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00047 Gabi-Chr3986 483870 484743 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gabi3986g00047 FAR1 1.8e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00047 - - tpra:123886525 241.506