Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00038 ATGATGGCTCAGAAGCACTTACACGAGCTACTGAAGGAGGATCAAGAACCATTCCTTTTAAACAAGTACATTTCTGATAGGCGTAGCCAAATGAAGAAAAATCCTTCCCCAAAGACAAGTTTGCAAGCGATGAAACGAAAACCAATCAATCAAAACTCAAACTTTTCAATGAATCTCTGCAAAAACGCTTGCCTTTTCTCCTTCCCAGAAACCCCAGACCTCAGAAAGTCTCCACTATTGGAATTCACATCACCAGCAAAAAGCCCCTGCAAGTCACCCAACGCCATTTTCCTTCATATCCCATCTCGAACAGCAACTCTTCTCCTCGAAGCCGCACTTAGGATCCATAAACAGTCATCAACCAGTTCCAAAACCAAAACCAAAGGATTTGGGCTATTCGGGTCCTTATTCAAGAGACTAACGCAAAGAAACCAGAACCGAAGAAGGGAAATAGAGGATGGTGGCGTGAAGGTTTCTGTGAAGGATATCTTAAAGTGGGATTCGTCTCTTGGGCGTAGAAAACTCTCCAATGACAAAGAGCAAGAAAAGATGACTTCTCAGAAAGTCAACAGCATGGTCAATGCAAATGCAAATGCGTGTGAGGTGGGGTTTCCATGTACTTACAATGGAAGGCCTAGCAGTGCTGTGTGGTCGGAGAGCAACGAAGATAAATCTCTGGACATGGAAACCTCGAGTAGTAGCCACTCTGCTGAAGGGAATCACTTTGTAATTAATCACAAAAATTGTTCTTGCTGCCACCATGCCTTCTGCGAAAGCCCTTTTCGTTTTGTTCTTCAAACGAGTCCTTCCTCCGACGGCCGCAAGACGCCGGAGCTACCGTCGCCAAGTCGTCACAGAACAGAGGACAAAGAAAGTAATGGAGCTGAGAGTGTCAACAAATTCGAGTCAGGGGAAGAAGAGAAGGAACAGTGCAGTCCAGTGTCTGTTTTAGACCCACCCTTCGAGGACGATGTCGAAGTGCATGGAAACGACGGTGAGGAGAATGGTTTTGATTTGGAGTGCAGCTATGCCATTGTACAGAGAGCTAAGCAGCAGCTATTGTACAAGCTTCGTAGATTTGAGAAACTAGCAGAGTTAGATCCAGTAGAACTTGAGAAAAGAATGCTGGATCAAGAAGAGAACGAGGATGAAGATGAAACATTTATGGAAGAGGATGAGGATAGCGAAGCATCATATAAAGAAAATGACTTTATAAAAGAACTAGTTTTCGAATCTCTCTGTCAGGCAAGGGTCCACGACAGACAGCATATCCCGGAAGAGTTAAAAAATTTGGTGTCTGATCTCATTGTTGAAGAAGAGAGAGAACTAAAGTCCTTAGAAGATAGGGACTTGGTGATAAGACGGATATGTAAGAGGCTGGAATTGTGGAAAGAAGTGGAGTCTAACACAATTGATATGATGGTAGAAGAGGACTTTTCAAGAGAGGATGGTGAGTGGAAGAAAAATGTAGAGCAGATGACAAAGATGGCTGGGGAGCTTGAGGTTGCTATTTTTGGCGTTCTGGTGGAGGAATTTTCAGAGGAACTAGTATGTTGTTAA 1560 0.4372 MMAQKHLHELLKEDQEPFLLNKYISDRRSQMKKNPSPKTSLQAMKRKPINQNSNFSMNLCKNACLFSFPETPDLRKSPLLEFTSPAKSPCKSPNAIFLHIPSRTATLLLEAALRIHKQSSTSSKTKTKGFGLFGSLFKRLTQRNQNRRREIEDGGVKVSVKDILKWDSSLGRRKLSNDKEQEKMTSQKVNSMVNANANACEVGFPCTYNGRPSSAVWSESNEDKSLDMETSSSSHSAEGNHFVINHKNCSCCHHAFCESPFRFVLQTSPSSDGRKTPELPSPSRHRTEDKESNGAESVNKFESGEEEKEQCSPVSVLDPPFEDDVEVHGNDGEENGFDLECSYAIVQRAKQQLLYKLRRFEKLAELDPVELEKRMLDQEENEDEDETFMEEDEDSEASYKENDFIKELVFESLCQARVHDRQHIPEELKNLVSDLIVEEERELKSLEDRDLVIRRICKRLELWKEVESNTIDMMVEEDFSREDGEWKKNVEQMTKMAGELEVAIFGVLVEEFSEELVCC 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00038 519 MobiDBLite consensus disorder prediction 377 397 - -
Gabi3986g00038 519 MobiDBLite consensus disorder prediction 215 237 - -
Gabi3986g00038 519 Coils Coil 429 449 - -
Gabi3986g00038 519 MobiDBLite consensus disorder prediction 267 320 - -
Gabi3986g00038 519 MobiDBLite consensus disorder prediction 278 312 - -
Gabi3986g00038 519 MobiDBLite consensus disorder prediction 376 397 - -
Gabi3986g00038 519 PANTHER OS04G0572500 PROTEIN 2 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00038 Gabi-Chr3986 375019 378398 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00038 1 322 TRM (TON1 Recruiting Motif) Superfamily AT5G03670 42.651 2.06e-62 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00038 - - gmx:100790018 699.508