Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00035 ATGGAAATGGAGGATCATCATCATCATCATCATCATCACCATGAACAGAAACAGTATGGCATCGCTGATCTCAGGCAGCTTGTGAATGGACCAAGACCAACCCATTTCCCGTCAATACCAGCGCAGCCCACGGCGGAGCTCTTCCCCGCCGGTCACCCGAATCTGACAGCCACACATCACCAACAACACTATGAGATGATGATGTTTGGTCGTCAAGTAGCTGACATAATGCCTCGTTGCCTTCATGACTTTGCCTCCACCGATTCTGCGACAACTGCTGCAGCCGTAACCACCAATACTAACATAACTGTAGCAACTCCAACCACCACAACTAGTGCTTCAACTCCTCCCCTTAGTGGCTTAGAAGCTGAGACTGCAGGCTGCATAGGTGTTGATGCCTCCACCGGAAGATGGCCAAGGCAAGAGACTCTTACTCTTCTTGAGATCAGATCTCGTTTGGACCATAAATTCAAAGAGGCTAATCAAAAGGGGCCACTATGGGATGAAGTTTCTAGGATCATGTCAGAAGAACATGGATATCAAAGGAGTGGGAAAAAGTGCAGGGAGAAGTTTGAGAACCTGTACAAATATTACAAGAAGACAAGGGAAGGAAAGGCAGGAAGACAGGATGGGAAGCACTACAGATTCTTCCGTCAACTTGAAGCCTTATATGGTGAAAATAGTAACCAAGTCTCAGTCCCCGAAACCAATTTTGGTAGCAGCAGCCTTCGTTTCCAGACAAGCAGCCATGCCCCTTCACAAACAAATCAAGATAAGTTTCATTCTCACAAGCATTGTGATAGCCTCAGCCTCACTAACTCCACTGACTTCAACACCTCTTCATCTGATGACAATGATCATAGCACTGAGGGACTGAAGGACAATGATTCCATGGAGAAGAGGAGAAAGAGGATGAGTGGAAGGAGCTGGAAGGGGAAGATTAAAGACTTCATTGACTCGCAGATGAGGAAGCTGGTGGAGAAGCAAGAGGAATGGTTGGATAAACTCATGAAGACACTGGAACAGAAGGAAAAGGAGAGGGTGTTAAGAGAGGAGGAATGGAGGAGACAAGAGGCAGAAAGGTTGGAGAGGGAGCACAGATTTTGGGCTAAGGAAAGGGCATGGATTGAAGCAAGGGATGCCGCTCTAATGGAGGCTTTGCAAAAATTAACAGGAAGCGATATAAAGACTCAATCTATTGAGGGTCTAGTAGCAGTTGGAATTCAAAACCGCAAAGAAAACCAGAATGAAGATGGAAGTGAAATACTAAATAGCACTGCCAAATGTACTGAAAGCTGGCCAGAATCTGAGATTACAAGGAATGCCAAGGACGGAAACAAGAAGCGGAAGGAAAACTCTAGAAGTTGTTTTTACTTCGATAACAATGACCATTCTTCACTATATGATCAAGGAGGTAGTGCTTATTGTGATATCAATGATCAAAGGCAAGAGACTGGGAGGCTACAAACAAATGATGGTTCTTCACCTTCAAATTCTAATGTTGGAAATGCAGTTGCTGCTGATAGCTGCTTTCCCTTCTTGATGAGTGAAGGAGGAAATTTGTGGGAGAATTACAGCTTGAAGGTTAATAAAGCAAACCACAACCAGTGA 1611 0.4488 MEMEDHHHHHHHHHEQKQYGIADLRQLVNGPRPTHFPSIPAQPTAELFPAGHPNLTATHHQQHYEMMMFGRQVADIMPRCLHDFASTDSATTAAAVTTNTNITVATPTTTTSASTPPLSGLEAETAGCIGVDASTGRWPRQETLTLLEIRSRLDHKFKEANQKGPLWDEVSRIMSEEHGYQRSGKKCREKFENLYKYYKKTREGKAGRQDGKHYRFFRQLEALYGENSNQVSVPETNFGSSSLRFQTSSHAPSQTNQDKFHSHKHCDSLSLTNSTDFNTSSSDDNDHSTEGLKDNDSMEKRRKRMSGRSWKGKIKDFIDSQMRKLVEKQEEWLDKLMKTLEQKEKERVLREEEWRRQEAERLEREHRFWAKERAWIEARDAALMEALQKLTGSDIKTQSIEGLVAVGIQNRKENQNEDGSEILNSTAKCTESWPESEITRNAKDGNKKRKENSRSCFYFDNNDHSSLYDQGGSAYCDINDQRQETGRLQTNDGSSPSNSNVGNAVAADSCFPFLMSEGGNLWENYSLKVNKANHNQ 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00035 536 Pfam Myb/SANT-like DNA-binding domain 137 223 IPR044822 -
Gabi3986g00035 536 MobiDBLite consensus disorder prediction 242 256 - -
Gabi3986g00035 536 MobiDBLite consensus disorder prediction 242 308 - -
Gabi3986g00035 536 FunFam trihelix transcription factor PTL-like 138 200 - -
Gabi3986g00035 536 MobiDBLite consensus disorder prediction 286 303 - -
Gabi3986g00035 536 CDD GT1 137 202 - -
Gabi3986g00035 536 ProSiteProfiles Myb-like domain profile. 130 195 IPR001005 -
Gabi3986g00035 536 PANTHER FI21293P1 92 498 - -
Gabi3986g00035 536 Coils Coil 326 362 - -
Gabi3986g00035 536 MobiDBLite consensus disorder prediction 267 285 - -
Gabi3986g00035 536 MobiDBLite consensus disorder prediction 28 54 - -
Gabi3986g00035 536 Gene3D - 138 200 - -
Gabi3986g00035 536 MobiDBLite consensus disorder prediction 416 448 - -
Gabi3986g00035 536 MobiDBLite consensus disorder prediction 416 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00035 Gabi-Chr3986 323177 326006 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00035 425 531 Trihelix Transcription Factor Family AT5G03680 36.134 2.15e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi3986g00035 Myb_DNA-bind_4 1.9e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00035 - - gmx:100813245 704.901