Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00026 ATGATATTTTGTCCTGTTAATAATGTGCACCAGGTAAATGGCTGCCTATTATACTTCGACAAAATTCCTGATGGCTTTTATCTAATTCACGGGATGGATCCCTATATATGGACCATGTGCACTGATCTGCAGGAAAATGGCCGAATTCCATCAGTTGATACACTAAAGTCTATGGATCCCTCTTCTGTTTCTTCTCTTGAAATAGTTTTGGTGGATAGACGTAGTGATCCTAGCTTAAAAGAATTGCAAAACAAAGTACATGACATTTCTTGTAGCTGCATGACGACAACAGAGGTTGTAGACCATCTTGCCAAGCTGGTTTGCAATTACATGGGGGGTTCAGCTTCAGTTTGGGAAGATGAATTTTTTCCCGTCTGGAGGGAGTGCATTAATGATCTGAGAGATCGCTTAGGATCTGCTGTTGTTCCAATTGGCAGTCTATCTATTGGACTCTGCAGGCATCGTGCTATATTATTCAAAGTACTAGCTGACACAATTGATTTACCGTGTCGAATTGCAAAGGGTTGTAAATATTGCTCAAGAGATGATGCCTCCTCATGTATTGTTCGATTTGAGCTTGACAGGGAATATATGGTTGATCTAATTGGGAAGCCAGGTTGCTTGTGCGAGCCTGATTCCTTGCTCAATGGTCCATCTTCCATCTCATTTTCTTCACCCTTGCGCTTTTCAAGACTTAAACCAGCTGAACCTACCATTGATTTCAGGTCATTGGCCAAACAGTATTTCTCAGATTGTCTATCTCTTGAGCTTGTCTTTGATAATGGTTCTGCAGAACAGAAGTGCAGAGACAGGAATAACCGTGGGCCAATTCCAAATGATAGCAACAGAGGTTCTCTCATTCGTCCGTACCCACAAGCTTACCATCCAAGCCGGCATGATCAAGGTTCTGAAACATTTGAATCATGTAACCTTCCTCAGAACGTTGTAGAACTGACAACTGTGGAAAAGGATCCACTGCCTTTAAAGCATAACCTTCCTGGTCATAGAGATGCACAAACCCCATTAGCACTAAAAAATTTCAATGTTGATGTTATTGAGGGTAGGGGTTTTGTTGAAGGAAGTCAACTGATTCCTAGCAAACCTACTAGAGAGCTTGCCCTTGATATGGAGGATTTGGACATACCGTGGAGTGATCTTGTTTTAAAAGAGAGAATAGGATCAGGTTCGTTTGGAACTGTACATCATGCTGAGTGGAATGGCTCAGAGGTTGCTGTGAAAATTCTGATGGAACAGGACTTTCATGGTGAACGCTTTAAGGAATTCCTGAGGGAGGTTGCAATTATGAAACATTTGCGGCATCCAAACATCGTTTTATTTATGGGTGCTGTCATTAAGCCTCCTAATTTATCAATTGTCACAGAATATTTGTCAAGGGGGAGCTTATATAGGCTGTTGCATAAACCTGGTGCCAGAGAGGTGTTGGATGAGAGGCGTAGGCTTAGTATGGCTTATGATGTGGCTAAGGGGATGAATTATCTTCATAAACGTAATCCTCCCATTGTTCATAGAGATCTGAAATCTCCAAACCTTCTCGTTGACAAGAAATATACAGTGAAGGTATGTGATTTTGGGCTTTCCCGACTAAAGGCAAATACATTTCTTTCATCCAAGTCAGCTGCAGGGACTCCTGAATGGATGGCTCCAGAAGTTCTTCGTGACGAGCCTTCCAATGAGAAGTCAGATGTTTACAGCTTTGGTGTCATCTTGTGGGAGATTGCAACATTGCAACAGCCGTGGGGTAATTTGAATCCAGCACAGGTTGTGGCAGCTGTTGGCTTTAAGGGAAAAAGACTTGAGATGCCACATGATTTGAATCCACGATTAGCCTCAATAATTGAGGCTTGCTGGGCCAACGAGTCCTGGAAACGCCCGTCTTTTTCAAGTATTATGGATTCTTTGAAAGTATTGCTCAAAATCCATACACCTCAACCTGGTCGTCCAAACATGCCATTGCTTACCTGA 1983 0.4236 MIFCPVNNVHQVNGCLLYFDKIPDGFYLIHGMDPYIWTMCTDLQENGRIPSVDTLKSMDPSSVSSLEIVLVDRRSDPSLKELQNKVHDISCSCMTTTEVVDHLAKLVCNYMGGSASVWEDEFFPVWRECINDLRDRLGSAVVPIGSLSIGLCRHRAILFKVLADTIDLPCRIAKGCKYCSRDDASSCIVRFELDREYMVDLIGKPGCLCEPDSLLNGPSSISFSSPLRFSRLKPAEPTIDFRSLAKQYFSDCLSLELVFDNGSAEQKCRDRNNRGPIPNDSNRGSLIRPYPQAYHPSRHDQGSETFESCNLPQNVVELTTVEKDPLPLKHNLPGHRDAQTPLALKNFNVDVIEGRGFVEGSQLIPSKPTRELALDMEDLDIPWSDLVLKERIGSGSFGTVHHAEWNGSEVAVKILMEQDFHGERFKEFLREVAIMKHLRHPNIVLFMGAVIKPPNLSIVTEYLSRGSLYRLLHKPGAREVLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWEIATLQQPWGNLNPAQVVAAVGFKGKRLEMPHDLNPRLASIIEACWANESWKRPSFSSIMDSLKVLLKIHTPQPGRPNMPLLT 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00026 660 Pfam Ethylene-responsive protein kinase Le-CTR1 12 209 - -
Gabi3986g00026 660 FunFam Serine/threonine-protein kinase isoform 1 376 464 - -
Gabi3986g00026 660 SMART serkin_6 386 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3986g00026 660 SUPERFAMILY Protein kinase-like (PK-like) 368 640 IPR011009 -
Gabi3986g00026 660 MobiDBLite consensus disorder prediction 266 286 - -
Gabi3986g00026 660 Gene3D Transferase(Phosphotransferase) domain 1 465 651 - -
Gabi3986g00026 660 PRINTS Tyrosine kinase catalytic domain signature 460 473 IPR001245 GO:0004672|GO:0006468
Gabi3986g00026 660 PRINTS Tyrosine kinase catalytic domain signature 611 633 IPR001245 GO:0004672|GO:0006468
Gabi3986g00026 660 PRINTS Tyrosine kinase catalytic domain signature 501 519 IPR001245 GO:0004672|GO:0006468
Gabi3986g00026 660 PRINTS Tyrosine kinase catalytic domain signature 567 589 IPR001245 GO:0004672|GO:0006468
Gabi3986g00026 660 PRINTS Tyrosine kinase catalytic domain signature 548 558 IPR001245 GO:0004672|GO:0006468
Gabi3986g00026 660 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 97 641 - -
Gabi3986g00026 660 CDD STKc_MAP3K-like 392 640 - -
Gabi3986g00026 660 Gene3D Phosphorylase Kinase; domain 1 379 464 - -
Gabi3986g00026 660 FunFam Serine/threonine-protein kinase CTR1 465 650 - -
Gabi3986g00026 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 507 519 IPR008271 GO:0004672|GO:0006468
Gabi3986g00026 660 ProSitePatterns Protein kinases ATP-binding region signature. 392 413 IPR017441 GO:0005524
Gabi3986g00026 660 Pfam Protein tyrosine and serine/threonine kinase 387 640 IPR001245 GO:0004672|GO:0006468
Gabi3986g00026 660 ProSiteProfiles Protein kinase domain profile. 386 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00026 Gabi-Chr3986 236635 253225 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00026 12 656 MAP Kinase Kinase Kinase AT5G03730 67.077 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Gabi3986g00026 PK_Tyr_Ser-Thr 4.7e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00026 K14510 - gmx:100810555 1046.19