Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00005 ATGAACAAGGTTTGTCCAATAAACCTGGCATTGGCATTGGCCTTTCTATGTGTTGTACCATCTCTGACACATGGTGCACCCCAGAATGACACACTCGCCCTCACCCAGTTCCGCTTCCAAACAGACGCACATGGCTATCTCGTCAGTAACTGGACCGGCGGCGATGCTTGCACCGCCGCATGGCGCGGCGTTCAGTGCTCCCCAAACGGCAGAATTGTGGGCCTCTCTATCCCTTCCCTCAATCTTCGAGGCCCCATTGAATCTCTATCAACGCTCACCTACTTGCGCCTCCTTGACCTCCACGACAACAGGTTGAACGGAACCATTGCTCCTCTCTCCAACTGCACAAGCCTGGAGCTCCTTTACCTCTCCGGCAATGACTTCTCCGGCGAGATACCGCCGGAGATAGCTTCCCTCAAGATTCTCCTCAGGCTTGACATCTCCGACAACAACATCCACGGTCAAGTTCCCAAGGAACTTTCACAGTTGACACATCTTCTCACGCTTCGGTTACAGAACAACGTGCTCTCTGGCCAAGTCCCTGATCTATGTTCTTCCCTGGTGAATCTCAGTGAGCTTAACATGACCAACAACGAGCTCCATGGACGCTTACCCGATGCAATGTTAAAGAAATTCGGCAATGAAAGCTTCTCTGGCAATAACGGTCTTTGTGGGTCTACTCCATTACCCGATTGCTCCATGACATATGAGACTCCTCCTTCTTCTGCATCAACAGAAACTGTTCCTTCAAACCCAAGCTCTTTGCCACAAACAAGTACTGTTATACCTCCTTCCAAAACCCAACCACGGAAGGGGTTGAGTCCCGGTGCCATTGTAGCCATAGTGGTGGCGGTTTCTGTGGCGGTTCTGGTGGTGATATCTTTCTTGGTGGCTCATTGTTGCGCCAGAGGAGGAGGAAGCTCCAAAAACTCGATGGTGGAGAGTGAGAGTTGGAAAAGGAAGAGCGGGAGTAGCAACGGAAGCGAGAAGAAGGTGTATGGCAATGGTGCTGCAGATAGAGATAGTGATGGGACCACTGAGACAGAGCGAAGCAAGCTTGTGTTTTTCGATAGGAGGAGTGAGTTTGAGCTTGAGGATCTGCTTCGAGCATCGGCAGAGATGCTCGGGAAAGGTAACTTGGGTACGGTTTACAGAGCAGTGCTTGATGATGGATGCACCGTGGCTGTGAAAAGACTCAAAGACGCAAACCCATGCGAGAGGAACGAGTTTGAACAGTATATGGATGTTGTAGGGAAGCTAAAGCACCCAAACATTGTTAGACTCAGAGCTTATTACTATGCTAAGGAAGAAAAGCTTCTTGTCTATGATTATCTCCCCAACGGAAGCTTGCATGCTCTCCTTCATGGGAACCGTGGTCCAGGAAGGATTCCATTAGATTGGACTACAAGAATAAGCTTGGTGTTAGGGGCAGCAAGAGGCCTTGCTAGGATTCATGCAGAGTATAGTGCGGCTAAGATACCTCACGGGAACGTGAAATCTTCCAATGTGCTTCTTGACAAGAATGGGGTTGCTTGCATCGCTGACTTTGGATTGTCACTGCTGTTGAACCCGGTTCACGCCATTGCAAGGTTGGGCGGGTGCAGAGCTCCTGAACAAGCTGAAATGAAGAGGTTGTCTCAGGAGGCTGACGTGTACAGTTTCGGGGTGTTAGTGTTGGAAGTTCTTACCGGGAGAGCTCCCTCACAGCACCCTTCTCCAACTCGTCCTCGTGTGGAGTTAGAGGGACAAGATCATGTGGATATGGATCTTCCCAAATGGGTTGGGTCGGTTGTGAAGGAAGAGTGGACATCAGAGGTGTTTGATCAGGAACTGTTGAGGTACAAGAACATTGAGGAAGAGCTTGTTTCAATGCTGAATGTGGGGCTTGCTTGTGTGGTTCCACAACCTGAGAAGAGACCAACCATGTTGGAAGTTGTTAAGATGGTTGAGGATATCAGGGTGGAACAATCTCCTCTCAGAGAGGACTTTGATGAATCACGCAATTCCCTTTCACCTTCCCTTGCCACTACCGAAGATGGCCTACCTTAG 2049 0.4983 MNKVCPINLALALAFLCVVPSLTHGAPQNDTLALTQFRFQTDAHGYLVSNWTGGDACTAAWRGVQCSPNGRIVGLSIPSLNLRGPIESLSTLTYLRLLDLHDNRLNGTIAPLSNCTSLELLYLSGNDFSGEIPPEIASLKILLRLDISDNNIHGQVPKELSQLTHLLTLRLQNNVLSGQVPDLCSSLVNLSELNMTNNELHGRLPDAMLKKFGNESFSGNNGLCGSTPLPDCSMTYETPPSSASTETVPSNPSSLPQTSTVIPPSKTQPRKGLSPGAIVAIVVAVSVAVLVVISFLVAHCCARGGGSSKNSMVESESWKRKSGSSNGSEKKVYGNGAADRDSDGTTETERSKLVFFDRRSEFELEDLLRASAEMLGKGNLGTVYRAVLDDGCTVAVKRLKDANPCERNEFEQYMDVVGKLKHPNIVRLRAYYYAKEEKLLVYDYLPNGSLHALLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNVKSSNVLLDKNGVACIADFGLSLLLNPVHAIARLGGCRAPEQAEMKRLSQEADVYSFGVLVLEVLTGRAPSQHPSPTRPRVELEGQDHVDMDLPKWVGSVVKEEWTSEVFDQELLRYKNIEEELVSMLNVGLACVVPQPEKRPTMLEVVKMVEDIRVEQSPLREDFDESRNSLSPSLATTEDGLP 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00005 682 Pfam Protein kinase domain 373 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3986g00005 682 Gene3D Transferase(Phosphotransferase) domain 1 445 671 - -
Gabi3986g00005 682 SUPERFAMILY L domain-like 29 210 - -
Gabi3986g00005 682 MobiDBLite consensus disorder prediction 308 331 - -
Gabi3986g00005 682 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Gabi3986g00005 682 SUPERFAMILY Protein kinase-like (PK-like) 373 649 IPR011009 -
Gabi3986g00005 682 FunFam Nuclear pore complex protein NUP107 27 182 - -
Gabi3986g00005 682 FunFam pollen receptor-like kinase 1 339 444 - -
Gabi3986g00005 682 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 654 IPR046959 -
Gabi3986g00005 682 Gene3D Phosphorylase Kinase; domain 1 337 444 - -
Gabi3986g00005 682 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 445 662 - -
Gabi3986g00005 682 MobiDBLite consensus disorder prediction 657 682 - -
Gabi3986g00005 682 MobiDBLite consensus disorder prediction 305 346 - -
Gabi3986g00005 682 ProSiteProfiles Protein kinase domain profile. 369 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi3986g00005 682 Gene3D Ribonuclease Inhibitor 143 221 IPR032675 -
Gabi3986g00005 682 Gene3D Ribonuclease Inhibitor 29 142 IPR032675 -
Gabi3986g00005 682 MobiDBLite consensus disorder prediction 234 272 - -
Gabi3986g00005 682 MobiDBLite consensus disorder prediction 234 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00005 Gabi-Chr3986 40545 43215 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3986g00005 28 678 Receptor kinase-like Gene Family AT2G36570 66.515 0.0 880
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gabi3986g00005 Pkinase 1.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00005 - - qsa:O6P43_009504 999.579