Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3986g00002 ATGGAACCAAATGGATTAGGTGGTGGGATATTTCCTAGCATTAGTAGTGGAATGCTAGGAGTAGAAAACCCTTTACAACAACAACAGCAAAATCTCCAAAATCAGCAAAATCCTCATCCTTTGCATCATCCCCAAATGGTTTCTTATGCTACTCACCATGACACTGACACTCATCAACAACCCCAACAATCAATCAAGCATGGTTACCCCTATTCAACCAACAAGACCAACAACAAGTCACAGACTACCCTAAGTGATGAAGATGAACCTGGGTTCACAGCAGATGATAGCTCTGGGGACCCCAAGAGGAAAATGTCACCATGGCATAGAATGAAGTGGACGGATGCTATGGTTAGGCTCTTAATAATGGCGGTTTATTACATTGGAGATGAAGGTGGTTCAGAACTTACTGATCCCACTGGGAAAAAGAAAGCTACGGGTTTGTTGCAGAAGAAAGGGAAATGGAAATCTGTGTCGAGGGGTATGATGGAAAAGGGGTTCTATGTGTCTCCTCAACAATGTGAGGACAAGTTCAATGATTTGAACAAGAGGTACAAGAGAGTCAACGACATTCTCGGCAAGGGAACAGCTTGTCGGGTTGTGGAAAACCAGAACTTGTTGGATACGATGGATTTGTCACCAAAGATGAAAGAAGAAGTTCGAAAACTTCTCAACTCCAAGCACCTATTCTTCAGAGAAATGTGTGCTTACCATAACAGTTGTGGTCATGGAAGCACTTCTACCTTGCAACCACAATCTGCAGAGGCCGGAACTGGAACAGGAACTGAGCCATCACAAGCTCAACCACAACAGCAGCAGCAGCAGCAACAACAACAACAACAAAGATGTTTCCATTCATCAGAGAACGGGGTGGGGAGTTTGAGGAGGATGTTGAAAGGGAGAAGCGTGGAAGAGGATGATGATGAAGATGAAGATGAAGACTCAGAGGACTATTCTGATGATGAGGAAGATGACTCGGCAGAAGGTGGGTCAAGGGGTCAAGTAGAGGATGATGAGAATGATGTGAGGAAGAGATCAAGGAAAGGAGGGTTTTGTGTGTCATCACAGGTGATGCAGCAATTGAACAGTGAGGTAACGGGTGTGTTGCAAGATGGGGTTAAGAGTCCTTGGGAGAAAAAACAGTGGATGAAGAAAAGGGTGTTGCAATTGGAGGAACAACAAGTAAGCTATCAAGTGCAAGCATTTGATCTTGAAAAGCAGAGGTTAAAATGGGCAAGGTTTAGCAGCAAGAAGGAAAGGGATATGGAGAAAGACAAACTTGAAAACGAAAGGAGGAGGTTGGAAAATGAGAAAATGGTTTTGCTCCTTCGCCAGAAGGAGCTTGAATTGTTGAATATTCAGCAGCAACAACAACAGCAACATTCTTCTACCTAG 1395 0.4387 MEPNGLGGGIFPSISSGMLGVENPLQQQQQNLQNQQNPHPLHHPQMVSYATHHDTDTHQQPQQSIKHGYPYSTNKTNNKSQTTLSDEDEPGFTADDSSGDPKRKMSPWHRMKWTDAMVRLLIMAVYYIGDEGGSELTDPTGKKKATGLLQKKGKWKSVSRGMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQNLLDTMDLSPKMKEEVRKLLNSKHLFFREMCAYHNSCGHGSTSTLQPQSAEAGTGTGTEPSQAQPQQQQQQQQQQQQRCFHSSENGVGSLRRMLKGRSVEEDDDEDEDEDSEDYSDDEEDDSAEGGSRGQVEDDENDVRKRSRKGGFCVSSQVMQQLNSEVTGVLQDGVKSPWEKKQWMKKRVLQLEEQQVSYQVQAFDLEKQRLKWARFSSKKERDMEKDKLENERRRLENEKMVLLLRQKELELLNIQQQQQQQHSST 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3986g00002 464 Gene3D - 113 187 - -
Gabi3986g00002 464 MobiDBLite consensus disorder prediction 1 106 - -
Gabi3986g00002 464 PANTHER F16F4.11 PROTEIN-RELATED 1 455 - -
Gabi3986g00002 464 Pfam Myb/SANT-like DNA-binding domain 110 236 IPR044822 -
Gabi3986g00002 464 MobiDBLite consensus disorder prediction 50 88 - -
Gabi3986g00002 464 MobiDBLite consensus disorder prediction 242 288 - -
Gabi3986g00002 464 MobiDBLite consensus disorder prediction 304 327 - -
Gabi3986g00002 464 MobiDBLite consensus disorder prediction 328 346 - -
Gabi3986g00002 464 Coils Coil 417 444 - -
Gabi3986g00002 464 MobiDBLite consensus disorder prediction 242 346 - -
Gabi3986g00002 464 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3986g00002 Gabi-Chr3986 24378 25772 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gabi3986g00002 Myb_DNA-bind_4 1.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3986g00002 - - gmx:547619 596.275