Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3981g00003 ATGCCACCAGGAACAATGGGTTGGCCTATTTTTGGTGAGACTGCAGGGTTTCTCAAACATGGACCAGATTTCATGAAAGCCAAGAGAGCAAGGTATGGAAATCTCTTCAAGTCTCACGCATTAGGCTCTCCTGTTGTTATCAGCATGGATCCAGAACTAAACAGATACATCCTCAAGAATGAAGCAAAGGGTCTAGTTCCAGGCTACCCTGTGTCCATGAGGAATATACTAGGGAATGGCAACATTGCTGAAGTTCATGGTGCTCCTCATAAACGTATTAGAGGGTCAATATTATCATTCATTGGTCCGGCTGCAATTAGAGGTCATCTTTTGCCAGAAGTTGACAAGTTTATGCGGTCTTTCCTTGACAATTGGGCTGGTACAACCATTGATATTCAACACAAAACCAAACAGATGGCATTCTTTGTATCAATGAAGCTGATTGTAGAAAATGAACCAAGTCCTTTCCATGAGACCTTTAAAGCTACATTTGACAACATAGTGTCAGGAACGTTTTCTCTGCCTATTAAAATTCCCGGCACCAATTACTTTCGAGGACTTCAGACAAGGAAAAAAGTGGTTGCAACACTGAAAGAGGTTTTAGCAAAGAGAAAATCTTCTTTGGATACTCATGCTGACATTCTTGACCAGCTTATGAGAAATGAGGATTTCAAATACAGACTTAATGATGAAGAAATAATCGATCAAATAATCACATTCTTATACTCAGGATATGAAACTGTATCAACTACTACAATGATGGCTGTCAAATATCTCCATGATAATCCTAGAGTTCTTGAAAAAGTAAGGGAAGAGCATTTTGCAATCCAACAAAGCAAAAAACAAGAGGATGTAGTAAGCTGGGATGACTATAAGCATATGCTTTATACTCGTGCGGTGATTTTTGAAACCTTGAGATTAGCTAACATTGTTAATGGGGTATTGAGGAAGACCACCACAGATGTAGAATTGAATGGATTTACCATTCCTCAGGGTTGGAGAGTTTATGTTTACACAAGGGAGACAAACTGTGATCCCTTCCTTTATCCAGAGCCTTTCAATTTTGACCCCTCTAGATGGCTGGAGAAAGGCTTGGAGTCTCATAACCATAACATGTTGTTTGGAGCAGGAGTTAGGCTATGTCCTGGAAAGGAATTGGGAATAGTTATAATCTCTATTTTCCTTCACTATTTTGTCACTAAATACAGGTGGAAAGTCGAGGGAAACAAACTGCTGAAGTTCCCGAGGGTTGAAGCACCGAATGGTCTACACATAAGGGTCGCAAAATGCTAG 1293 0.4006 MPPGTMGWPIFGETAGFLKHGPDFMKAKRARYGNLFKSHALGSPVVISMDPELNRYILKNEAKGLVPGYPVSMRNILGNGNIAEVHGAPHKRIRGSILSFIGPAAIRGHLLPEVDKFMRSFLDNWAGTTIDIQHKTKQMAFFVSMKLIVENEPSPFHETFKATFDNIVSGTFSLPIKIPGTNYFRGLQTRKKVVATLKEVLAKRKSSLDTHADILDQLMRNEDFKYRLNDEEIIDQIITFLYSGYETVSTTTMMAVKYLHDNPRVLEKVREEHFAIQQSKKQEDVVSWDDYKHMLYTRAVIFETLRLANIVNGVLRKTTTDVELNGFTIPQGWRVYVYTRETNCDPFLYPEPFNFDPSRWLEKGLESHNHNMLFGAGVRLCPGKELGIVIISIFLHYFVTKYRWKVEGNKLLKFPRVEAPNGLHIRVAKC 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3981g00003 430 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS E-class P450 group I signature 298 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS E-class P450 group I signature 232 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS E-class P450 group I signature 338 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS E-class P450 group I signature 381 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS E-class P450 group I signature 371 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS E-class P450 group I signature 252 278 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 SUPERFAMILY Cytochrome P450 2 412 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PANTHER CYTOCHROME P450 26 2 406 - -
Gabi3981g00003 430 CDD CYP90-like 29 427 - -
Gabi3981g00003 430 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS P450 superfamily signature 372 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS P450 superfamily signature 299 310 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 PRINTS P450 superfamily signature 243 260 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 Pfam Cytochrome P450 2 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi3981g00003 430 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 374 383 IPR017972 GO:0005506|GO:0016705
Gabi3981g00003 430 Gene3D Cytochrome P450 1 429 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3981g00003 Gabi-Chr3981 27502 31222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3981g00003 49 428 Cytochrome P450 AT5G38970 56.806 1.28e-159 454