Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3980g00031 ATGCCTCGTGGGACGCTTGAAGTTGTTTTGGTCAGTGCCAAAGGCCTTGAGGACAATGATTTTCTCTCTAGCGTAGATCCTTATGTGATTCTTACTTACCGGGCACAGGAGCACAAGAGCACTGTGCAAGAAGGTGCTGGATCTAACCCACAATGGAATGAGAGCTTTCTTTTCACTATTTCTGACAGTGCTTCTGAACTTAATCTAAGGATAATGGATAAAGACAAGTTTAGTAAAGATGATTTTCTTGGCGAGGCAACAATTCCTTTGGATGCAGTGTTAGAAGAGGGTACCTTTCCTGAGACTGCTTACAATGTTGTGAAGGACCAAGAATTTTGTGGGGAGATTAAGGTGGCTCTCACTTTTACTCCTGAGAGAGGGGATAGCTATGGTCACAATGCAGAGGGGGAGAGCTATGGTGGATGGAGAGAATCAAGTAGGGAATTTTAA 450 0.4378 MPRGTLEVVLVSAKGLEDNDFLSSVDPYVILTYRAQEHKSTVQEGAGSNPQWNESFLFTISDSASELNLRIMDKDKFSKDDFLGEATIPLDAVLEEGTFPETAYNVVKDQEFCGEIKVALTFTPERGDSYGHNAEGESYGGWRESSREF 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3980g00031 149 MobiDBLite consensus disorder prediction 127 149 - -
Gabi3980g00031 149 Pfam C2 domain 4 100 IPR000008 -
Gabi3980g00031 149 PANTHER C2 DOMAIN-CONTAINING 1 126 - -
Gabi3980g00031 149 Gene3D C2 domain 2 125 IPR035892 -
Gabi3980g00031 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gabi3980g00031 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 125 IPR035892 -
Gabi3980g00031 149 SMART C2_3c 5 102 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3980g00031 Gabi-Chr3980 386897 388688 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3980g00031 4 119 C2H2 Transcription Factor Family AT4G21160 31.034 7.17e-13 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3980g00031 - - gmx:100500006 240.736