Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3977g00003 ATGTCTGATTTTCCCAATGAATATTTAACGAATCATACGATTGGGGGACAAAGTTTTGAAAGGTCCCGGGTCTTGCCTGAGAGCCATGTCCTTAGAAGTTTCTCAACTGATAAAGAGAGAGCAAACAATGTTGCTAAGATCAAAGTTGTGGTTCGGAAGAGACCACTAAATAAGAAGGAAATAGCAAAGAAAGAGGAAGACATTATTACCATAGATTCAAATTCTCTCACAGTTCATGAAAGAAAACTCAAGGTTGATTTAACAGAATATGTTGAAAAACATGAGTTTGTTTTTGATGCTGTGCTGAATGAAGATGTTTCAAATGATGATGTGTATACTGAAACTGTAGAGCCCGTAGTTCCGCTGATTTTTCAACGAACCAAAGCAACTTGCTTTGCATATGGTCAAACTGGGAGTGGGAAAACGTATACTATGCAACCATTGCCTCTCAAAGCATCTCAAGATATTTTCAGATTAATGCACCACAAATACCGGAATCAAGGTTTCCAATTGTTTGTTAGTTTCTTCGAAATATATGGGGGGAAACTATTTGATCTCCTCAATGATCGAAAAAAACTTTGCATGAGGGAGGATGGAAAACAGCAGGTTTGCATTGTTGGCTTGCAAGAATACAGAGTATCTAAAGTTGAGACAATCAAAGAATTCATTGAGAAAGGAAATGCTACCAGAAGTACTGGTACAACTGGTGCAAATGAGGAATCCTCTCGATCACATGCTATTCTTCAGCTTTGTATCAAGAGATCAGCTGATGGGACTGAATCAAAGCCTGCTCGAATTGTGGGCAAACTATCTTTTATAGATTTAGCTGGAAGTGAACGTGGTGCAGATACTACAGATAATGATAAGCAGACTAGGATTGAAGGTGCTGAAATTAATAAAAGCTTACTTGCGCTGAAAGAATGCATTAGAGCTCTAGACAATGACCAAGGGCATATCCCTTTCAGAGGAAGTAAATTGACGGAAGTTCTGCGAGACTCTTTTGTTGGTGATTCACGAACTGTAATGATATCATGCATTTCGCCAAGCTCAGGATCATGTGAGCATACTCTTAACACGTTAAGATATGCTGACAGAGTGAAGAGCCTGTCAAAAGGGAACAGCTCCAGAAGGGATCCCCTTTCTTCCTCCAACCTTAGAGACTCAACTGTATTGTCTGCGTCTTCAGCTTTATCTCGTGATGATACATTTGAAGATGAAATAACATATGTTTCCAGTGAGAGGAATCGGTTTGGTTGGTCCAAACAGTTTGAAAGAGAACCCTCTCCTCCAATTAATATGGATCGTATTCCAAGTGGTAGGATGGGGGGAAATTTGGCACCATCCGTGTATTCTGATCCACTAAAGGGTCATAGAGGTGGTCAAAATGACAGAGCTGAAAATGAAAATGACTATCCAGGACCAACATATGAACAAGACAGAACAAGAAAAACAATTAAGCGGGTGGATAACACCCAATTATTTGCTGTGGAGGACAAGAGGAAGATAGAATCTCGTGTTAAACATGTAGATCTACCACATTTTGAGGCTAATCATTCTGATCCTGATGGTGATTTAAATGCCCTGCTGAAGGAAGAGGAAGATCTTGTAACTGCTCACCGGAGACAAGTGGAGGAAACAATAGACATTGTTAGGGAGGAGATGAATTTACTTGTTGAAGCGGATCAACCAGGAAATCAACTGGATGATTATGTTTCCAAATTGAATACCATTTTGTCACAAAAGGCTGCTGGAATCCTTCAATTGCAGACGCAGTTGGCTCAATTTCAGAGACGTTTAAATGAGTATAATGTTGTGGTATCTTCCGGTAACTGA 1833 0.3977 MSDFPNEYLTNHTIGGQSFERSRVLPESHVLRSFSTDKERANNVAKIKVVVRKRPLNKKEIAKKEEDIITIDSNSLTVHERKLKVDLTEYVEKHEFVFDAVLNEDVSNDDVYTETVEPVVPLIFQRTKATCFAYGQTGSGKTYTMQPLPLKASQDIFRLMHHKYRNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVSKVETIKEFIEKGNATRSTGTTGANEESSRSHAILQLCIKRSADGTESKPARIVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGDSRTVMISCISPSSGSCEHTLNTLRYADRVKSLSKGNSSRRDPLSSSNLRDSTVLSASSALSRDDTFEDEITYVSSERNRFGWSKQFEREPSPPINMDRIPSGRMGGNLAPSVYSDPLKGHRGGQNDRAENENDYPGPTYEQDRTRKTIKRVDNTQLFAVEDKRKIESRVKHVDLPHFEANHSDPDGDLNALLKEEEDLVTAHRRQVEETIDIVREEMNLLVEADQPGNQLDDYVSKLNTILSQKAAGILQLQTQLAQFQRRLNEYNVVVSSGN 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3977g00003 610 MobiDBLite consensus disorder prediction 369 389 - -
Gabi3977g00003 610 Coils Coil 540 560 - -
Gabi3977g00003 610 ProSiteProfiles Kinesin motor domain profile. 46 369 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3977g00003 610 PANTHER KINESIN-RELATED PROTEIN 6 31 604 IPR027640 GO:0003777|GO:0007018
Gabi3977g00003 610 FunFam Kinesin-like protein 28 372 - -
Gabi3977g00003 610 Coils Coil 585 605 - -
Gabi3977g00003 610 MobiDBLite consensus disorder prediction 422 479 - -
Gabi3977g00003 610 Gene3D Kinesin motor domain 25 372 IPR036961 -
Gabi3977g00003 610 CDD KISc_KIF2_like 46 367 - -
Gabi3977g00003 610 MobiDBLite consensus disorder prediction 373 389 - -
Gabi3977g00003 610 ProSitePatterns Kinesin motor domain signature. 268 279 IPR019821 GO:0003777|GO:0005524|GO:0007018
Gabi3977g00003 610 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3977g00003 610 PRINTS Kinesin heavy chain signature 319 340 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3977g00003 610 PRINTS Kinesin heavy chain signature 235 252 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3977g00003 610 PRINTS Kinesin heavy chain signature 269 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3977g00003 610 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 369 IPR027417 -
Gabi3977g00003 610 Pfam Kinesin motor domain 52 368 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gabi3977g00003 610 SMART kinesin_4 44 375 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3977g00003 Gabi-Chr3977 18503 23654 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3977g00003 15 369 Calmodulin-binding Proteins AT5G65930 34.959 1.88e-46 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3977g00003 K10393 - gmx:100783382 1056.59