Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3976g00064 ATGGTGCAATCAAAGAAATTTAGAGGTGTCAGGCAACGCCATTGGGGCTCGTGGGTTTCTGAGATTCGTCATCCATTATTGAAAAGGAGGGTGTGGCTTGGGACATTTGAGACAGCTGAAGAAGCAGCTAGAGCATATGATGAGGCAGCGATTTTGATGAGTGGAAGAAATGCAAAAACAAACTTCCCAGTTGCTGATAACACAACGAGGAATCAAAGTTCAACATCCTCTTCCACAACATTATCTGCAGTTCTCAGTGCAAAGCTTAGGAAGTGCTGCAAATCCCCATCACCTTCCCTCACATGTTTAAGGCTTGACACTGAGAATTCACACTTTGGGGTGTGGCAAAAGCGAGCTGGTCCTCGTTCTGACTCAAACTGGATCATGATGGTTGAGTTGGAAAGGAAGAAAATGGGACCTTCTGATTCAGAATCACCAGTTCTTGATGCACCAGAGAAGGTAAAACCAGAGGAAGTGAATGGCTTAGATGAGGAGCAGAGGATTGCTCTGCAGATGATAGAGGAACTTCTGAATAGGAATTAA 543 0.4457 MVQSKKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDEAAILMSGRNAKTNFPVADNTTRNQSSTSSSTTLSAVLSAKLRKCCKSPSPSLTCLRLDTENSHFGVWQKRAGPRSDSNWIMMVELERKKMGPSDSESPVLDAPEKVKPEEVNGLDEEQRIALQMIEELLNRN 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3976g00064 180 CDD AP2 5 65 IPR001471 GO:0003700|GO:0006355
Gabi3976g00064 180 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Gabi3976g00064 180 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Gabi3976g00064 180 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Gabi3976g00064 180 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Gabi3976g00064 180 Coils Coil 173 180 - -
Gabi3976g00064 180 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Gabi3976g00064 180 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Gabi3976g00064 180 MobiDBLite consensus disorder prediction 137 162 - -
Gabi3976g00064 180 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 3 140 - -
Gabi3976g00064 180 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Gabi3976g00064 180 FunFam Ethylene-responsive transcription factor 2 5 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3976g00064 Gabi-Chr3976 608395 609241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3976g00064 1 180 AP2-EREBP Transcription Factor Family AT1G15360 62.136 2.92e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gabi3976g00064 AP2 7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3976g00064 - - gmx:100796962 288.115