Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3976g00033 ATGAGTACGGCTCTTCTTTCGGAGCTTGCGACGGAGATAGTGATCCCGGCGTGTGCCGTCGTTGGTATCATCTTCTCATTGGTGCAGTGGTTCCTGGTTTCGCGCGTCAAGCTCACGCCGGAGCGTCATGGAACGTCGTCGTCCCCCCGCGACAACAAGAACGGCTACGGAGACTACTTGATTGAGGAAGAAGAAGGCATCAACGACCACAATGTCGTCGTCAAATGCGCTGATATACAGAACGCCATTTCCGAAGGTGCAACGTCTTTTCTTTTCACTGAATATCAATATGTTGGAATCTTCATGGTTGCTTTTGCAATCCTGATCTTCCTTTTCTTGGGCTCTGTGGAAAGCTTCAGTACTAAGAGCCAGCCCTGCACATATGATAAGAGCAAGCTATGCAAGCCAGCTCTTGCAACTGCATTGTTCAGCACTGTATCTTTCTTGCTTGGTGCTATAACTTCAGTTTTATCTGGTTTCCTTGGGATGAAAATTGCGACCTATGCCAATGCAAGGACAACCTTGGAAGCGAGAAAGGGAGTTGGAAAGGCTTTTATTACTGCATTTAGGTCTGGTGCAGTGATGGGTTTCCTTCTTGCAGCAAGTGGTCTTTTGGTGCTCTACATTACCATCAATCTCTTCAAGCTATATTACGGTGATGATTGGGAAGGTCTTTTTGAGGCTATCACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGGAGAGTCGGTGGTGGTATCTATACCAAAGCTGCGGATGTTGGCGCTGATCTGGTTGGAAAAGTTGAAAGAAATATCCCCGAGGATGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGAGATATTGCTGGGATGGGTTCTGATCTTTTTGGCTCATATGCTGAATCATCTTGTGCTGCCCTAGTTGTTGCTTCCATTTCCTCATTTGGAATCAACCACGACTTCACTGCCATGTTATATCCCCTGCTCATCAGTTCTATGGGCATTCTTGTCTGTTTGATTACTACTCTCTTTGCAACTGATTTCTTTGAGATCAAGGCTGTCAAGGAAATCGAACCAGCATTAAAAAACCAGCTTATCATCTCTACAATACTCATGACTGTTGGAATTGCAATTGTGAGTTGGCTTGCTCTGCCATCATCCTTCACAATTTTCAACTTTGGGGTTCAGAAGGAAGTAAAGAACTGGCAGCTGTTCCTATGTGTGGGTGTTGGTCTCTGGGCTGGGCTTATAATTGGGTTTGTTACTGAATATTATACAAGCAATGCTTACAGCCCTGTACAAGATGTTGCTGATTCCTGCCGGACTGGAGCTGCAACCAATGTCATCTTTGGCCTTGCTTTGGGATACAAATCTGTCATTATTCCTATTTTTGCCATTGCAATCAGCATTTTTGTGAGTTTTACTTTTGCTGCAATGTATGGTATTGCTGTGGCAGCCCTCGGGATGCTGAGCACCATTGCAACTGGGTTGGCTATTGATGCCTATGGGCCTATCAGTGACAATGCGGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGTATCCGTGAGAGAACTGATGCCCTTGATGCTGCTGGCAACACTACTGCTGCCATTGGCAAGGGATTTGCTATTGGATCTGCTGCGCTAGTGTCTTTGGCCCTATTTGGTGCTTTTGTCAGCAGGGCAGGAATTTCAACTGTCGATGTCTTGACTCCCAAGGTGTTTATTGGACTCCTCGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCGATGACCATGAAGAGTGTAGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGAAGGCAGTTCAACACCATTCCAGGACTCATGGAGGGTCTTGCCAAGCCTGATTATGCTACCTGTGTCAAGATTTCTACTGATGCATCCATCAAGGAGATGATTCCTCCAGGTGCCCTTGTCATGCTCACACCACTCATTGTTGGTACCTTCTTCGGTGTAGAAACTCTTTCAGGGGTTCTTGCAGGCTCTTTAGTTTCTGGCGTGCAGATCGCAATATCAGCATCCAACACTGGTGGTGCCTGGGATAATGCTAAGAAGTACATTGAGGCCGGTGCGTCTGAGCATGCAAGGACCTTGGGCCCAAAGGGATCTGATCCGCACAAGGCAGCTGTAATTGGCGATACCATTGGAGACCCTCTGAAGGATACTTCAGGCCCTTCACTCAACATCCTTATTAAGCTCATGGCGGTTGAGTCACTTGTATTTGCTCCATTTTTTGCCACCCATGGCGGCCTGCTTTTCAAGATCTTTTGA 2307 0.4677 MSTALLSELATEIVIPACAVVGIIFSLVQWFLVSRVKLTPERHGTSSSPRDNKNGYGDYLIEEEEGINDHNVVVKCADIQNAISEGATSFLFTEYQYVGIFMVAFAILIFLFLGSVESFSTKSQPCTYDKSKLCKPALATALFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAASGLLVLYITINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHDFTAMLYPLLISSMGILVCLITTLFATDFFEIKAVKEIEPALKNQLIISTILMTVGIAIVSWLALPSSFTIFNFGVQKEVKNWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGLAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3976g00033 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi3976g00033 768 NCBIfam V-type H(+)-translocating pyrophosphatase 10 763 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi3976g00033 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi3976g00033 768 PIRSF H+-PPtase 8 766 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Gabi3976g00033 768 Pfam Inorganic H+ pyrophosphatase 45 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3976g00033 Gabi-Chr3976 337795 342819 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3976g00033 4 631 Primary Pumps ATPases AT1G15690 89.348 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3976g00033 K23025 - gmx:100803691 1434.85