Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3976g00011 ATGGCAGCTTCAGCAGCAGCAAAGAAGGTATGCGTAACTGGGGCAGGAGGTTTTGTAGCTTCTTGGCTCGTTAAGGTTCTTCTTTCCAAAGGATACATCGTTCATGGAACTGTCAGACAACCTGGTAGTCAGAAATATGAGCACTTGCTGAAACTAGAGAGAGCTTCTGAGAACCTTAAACTCTTCAAGGCTGATCTCTTGAGTTACGAATCTGTTCACTCAGCAATTGTTGGATGCAGTGCAGTTTTCCATGTTGCTAGCCCTGTACCCTCAACAATTGTACCCAATCCTGAGGTAGAAGTGATTGAGCCTGCTGTGAAGGGAACTGCTAATGTACTTGAAGCTTGTCTTAAAGCTAAAGTGGAACGAGTTGTCTTTGTATCATCTATTGCTGCGATTGGCATGAACCCCAATTTCTCTAAGGATAAAGTGCTTGATGAGTCCTGTTGGTCCGATAAAGAGTACTGCAGAAAAAGTAAGAACTGGTATTGTTTTTCCAAGACAGAGGCAGAGGAGCAAGCCCTGGACTTTGCTAAAAGAACCGGGCTTAGTGTGGTAAGCATTTGTCCTACCCTTGTGCTGGGGCCAATTTTACAGTCAACTACTGTTAATTCTAGTAGCTTGGTTCTCCTCAAGATTTTAAAAGGTTCTGACTCGTTGGAGAATAAGCATCGTTGGATAGTAGATGTACGAGATTTAGTTGATGCTTTACTTTTGGCATATGAGAAGCATGAGGCAGAAGGGAGATACATATGCACTTCATTCCCAATCAAGACACAGGATTTGGTGGAGAAACTAAAGAGTATATATCCCAACTACAATTACCCTACGAACTTTATTGAGGTGGATGATTACAGAGTTTTGAGCTCAGAGAAACTGCAAAGGTTGGGTTGGAAATACAGGCCACTAGAGGAGACACTCATTGATTCTGTTGAGAGCTATCGGGAGGCTGGACTCTTGCAATCAGAATAG 972 0.43 MAASAAAKKVCVTGAGGFVASWLVKVLLSKGYIVHGTVRQPGSQKYEHLLKLERASENLKLFKADLLSYESVHSAIVGCSAVFHVASPVPSTIVPNPEVEVIEPAVKGTANVLEACLKAKVERVVFVSSIAAIGMNPNFSKDKVLDESCWSDKEYCRKSKNWYCFSKTEAEEQALDFAKRTGLSVVSICPTLVLGPILQSTTVNSSSLVLLKILKGSDSLENKHRWIVDVRDLVDALLLAYEKHEAEGRYICTSFPIKTQDLVEKLKSIYPNYNYPTNFIEVDDYRVLSSEKLQRLGWKYRPLEETLIDSVESYREAGLLQSE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3976g00011 323 FunFam NAD(P)-binding Rossmann-fold superfamily protein 3 321 - -
Gabi3976g00011 323 Gene3D - 2 323 - -
Gabi3976g00011 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 311 - -
Gabi3976g00011 323 CDD FR_SDR_e 10 298 - -
Gabi3976g00011 323 Pfam NAD dependent epimerase/dehydratase family 10 246 IPR001509 -
Gabi3976g00011 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 319 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3976g00011 Gabi-Chr3976 78240 89276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3976g00011 9 320 Monolignol Biosynthesis Gene Families AT2G33590 64.856 2.55e-150 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3976g00011 - - gmx:100784817 490.345