Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi3976g00009 ATGGCAGCTTCAGCAGCAGCAAAGAAGGTATGCGTAACTGGGGCAGGAGGTTTTGTAGCTTCTTGGCTCGTTAAGGTTCTTCTTTCCAAAGGATACATCGTTCATGGAACTGTCAGACAACCTGGTAGTCAGAAATATGAGCACTTGCTGAAACTAGAGAGAGCTTCTGAGAACCTTAAACTCTTCAAGGCTGATCTCTTGAGTTACGAATCTGTTCACTCAGCAATTGTTGGATGCAGTGCAGTTTTCCATGTTGCTAGCCCTGTACCCTCAACAATTGTACCCAATCCTGAGGTAGAAGTGATTGAGCCTGCTGTGAAGGGAACTGCTAATGTACTTGAAGCTTGTCTTAAAGCTAAAGTGGAACGAGTTGTCTTTGTATCATCTATTGCTGCGATTGGCATGAACCCCAATTTCTCTAAGGATAAAGTGCTTGATGAGTCCTGTTGGTCCGATAAAGAGTACTGCAGAAAAAGTTCTGACTCGTTGGAGAATAAGCATCGTTGGATAGTAGATGTACGAGATTTAGTTGATGCTTTACTTTTGGCATATGAGAAGCATGAGGCAGAAGGGAGATACATATGCACTTCATTCCCAATCAAGACACAGGATTTGGTGGAGAAACTAAAGAGTATATATCCCAACTACAATTACCCTACGAACTTTATTGAGGTGGATGATTACAGAGTTTTGAGCTCAGAGAAACTGCAAAGGTTGGGTTGGAAATACAGGCCACTAGAGGAGACACTCATTGATTCTGTTGAGAGCTATCGGGAGGCTGGACTCTTGCAATCAGAATAG 801 0.4295 MAASAAAKKVCVTGAGGFVASWLVKVLLSKGYIVHGTVRQPGSQKYEHLLKLERASENLKLFKADLLSYESVHSAIVGCSAVFHVASPVPSTIVPNPEVEVIEPAVKGTANVLEACLKAKVERVVFVSSIAAIGMNPNFSKDKVLDESCWSDKEYCRKSSDSLENKHRWIVDVRDLVDALLLAYEKHEAEGRYICTSFPIKTQDLVEKLKSIYPNYNYPTNFIEVDDYRVLSSEKLQRLGWKYRPLEETLIDSVESYREAGLLQSE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi3976g00009 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 259 IPR036291 -
Gabi3976g00009 266 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 169 254 - -
Gabi3976g00009 266 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 12 148 IPR002225 GO:0003854|GO:0006694|GO:0016616
Gabi3976g00009 266 Gene3D - 162 266 - -
Gabi3976g00009 266 Gene3D - 2 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi3976g00009 Gabi-Chr3976 78235 89276 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi3976g00009 9 263 Monolignol Biosynthesis Gene Families AT2G33600 52.396 3.32e-101 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi3976g00009 - - pvy:116128633 348.206